T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1398..28561
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CWR46_RS24935 (CWR46_24930) | 1..436 | - | 436 | WP_032419546 | hypothetical protein | - |
| CWR46_RS24940 (CWR46_24935) | 516..899 | + | 384 | WP_019725042 | DUF1496 domain-containing protein | - |
| CWR46_RS29230 | 1004..1174 | + | 171 | WP_234715330 | hypothetical protein | - |
| CWR46_RS24950 (CWR46_24945) | 1398..2705 | + | 1308 | WP_015059988 | hypothetical protein | trbA |
| CWR46_RS24955 (CWR46_24950) | 2716..3666 | + | 951 | WP_004206886 | DsbC family protein | trbB |
| CWR46_RS24960 (CWR46_24955) | 3679..5766 | + | 2088 | WP_004206885 | conjugal transfer protein TrbC | - |
| CWR46_RS29360 | 5817..5912 | - | 96 | WP_004206884 | DinQ-like type I toxin DqlB | - |
| CWR46_RS24965 (CWR46_24960) | 7135..8190 | - | 1056 | WP_015060006 | plasmid replication initiator RepA | - |
| CWR46_RS24970 (CWR46_24965) | 8486..8728 | - | 243 | WP_023893611 | IncL/M type plasmid replication protein RepC | - |
| CWR46_RS24975 (CWR46_24970) | 8797..9450 | - | 654 | WP_015060005 | hypothetical protein | - |
| CWR46_RS24980 (CWR46_24975) | 9452..11647 | - | 2196 | WP_015062834 | DotA/TraY family protein | traY |
| CWR46_RS24985 (CWR46_24980) | 11640..12236 | - | 597 | WP_015060003 | hypothetical protein | - |
| CWR46_RS24990 (CWR46_24985) | 12233..13441 | - | 1209 | WP_011091082 | conjugal transfer protein TraW | traW |
| CWR46_RS24995 (CWR46_24990) | 13438..16488 | - | 3051 | WP_031942490 | plasmid transfer protein | traU |
| CWR46_RS25000 (CWR46_24995) | 16485..16979 | - | 495 | WP_011091080 | hypothetical protein | - |
| CWR46_RS25005 (CWR46_25000) | 17025..17414 | - | 390 | WP_011091078 | DUF6750 family protein | traR |
| CWR46_RS25010 (CWR46_25005) | 17431..17961 | - | 531 | WP_104011266 | conjugal transfer protein TraQ | traQ |
| CWR46_RS25015 (CWR46_25010) | 17985..18689 | - | 705 | WP_031942491 | conjugal transfer protein TraP | traP |
| CWR46_RS25020 (CWR46_25015) | 18701..20050 | - | 1350 | WP_004187474 | conjugal transfer protein TraO | traO |
| CWR46_RS25025 (CWR46_25020) | 20062..21213 | - | 1152 | WP_004187471 | DotH/IcmK family type IV secretion protein | traN |
| CWR46_RS25035 (CWR46_25030) | 21222..21935 | - | 714 | WP_004187467 | DotI/IcmL family type IV secretion protein | traM |
| CWR46_RS25040 (CWR46_25035) | 22003..22413 | + | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| CWR46_RS25045 (CWR46_25040) | 22442..22597 | + | 156 | WP_172693602 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| CWR46_RS25050 (CWR46_25045) | 22598..23110 | - | 513 | WP_011091071 | hypothetical protein | traL |
| CWR46_RS29235 | 23076..26333 | - | 3258 | WP_242446732 | LPD7 domain-containing protein | - |
| CWR46_RS25060 (CWR46_25055) | 26358..26618 | - | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| CWR46_RS25065 (CWR46_25060) | 26608..27771 | - | 1164 | WP_004187313 | plasmid transfer ATPase TraJ | virB11 |
| CWR46_RS25070 (CWR46_25065) | 27782..28561 | - | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| CWR46_RS25075 (CWR46_25070) | 28558..29058 | - | 501 | WP_004187320 | DotD/TraH family lipoprotein | - |
| CWR46_RS25080 (CWR46_25075) | 29072..31051 | - | 1980 | WP_004187323 | TraI/MobA(P) family conjugative relaxase | - |
| CWR46_RS29240 | 31038..31565 | - | 528 | WP_172740549 | plasmid mobilization protein MobA | - |
| CWR46_RS25090 (CWR46_25085) | 31600..31995 | + | 396 | WP_019725163 | hypothetical protein | - |
| CWR46_RS25095 (CWR46_25090) | 32497..33033 | - | 537 | WP_004187332 | hypothetical protein | - |
| CWR46_RS25100 (CWR46_25095) | 33166..33477 | - | 312 | WP_004187333 | hypothetical protein | - |