T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 83243..109279
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB188_RS01205 (AB188_01205) | 83243..85537 | - | 2295 | WP_032736842 | type IV conjugative transfer system coupling protein TraD | virb4 |
| AB188_RS01210 (AB188_01210) | 85744..86271 | - | 528 | WP_032736843 | hypothetical protein | - |
| AB188_RS01215 (AB188_01215) | 86282..89125 | - | 2844 | WP_047727552 | conjugal transfer mating-pair stabilization protein TraG | traG |
| AB188_RS01220 (AB188_01220) | 89125..90495 | - | 1371 | WP_032736846 | conjugal transfer pilus assembly protein TraH | traH |
| AB188_RS01225 (AB188_01225) | 90482..91045 | - | 564 | WP_224250969 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| AB188_RS01230 (AB188_01230) | 91032..91268 | - | 237 | WP_032736848 | type-F conjugative transfer system pilin chaperone TraQ | - |
| AB188_RS01235 (AB188_01235) | 91279..92031 | - | 753 | WP_042946285 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| AB188_RS01240 (AB188_01240) | 92052..92378 | - | 327 | WP_032736851 | hypothetical protein | - |
| AB188_RS01245 (AB188_01245) | 92425..92610 | - | 186 | WP_032736852 | hypothetical protein | - |
| AB188_RS01250 (AB188_01250) | 92607..92843 | - | 237 | WP_032736854 | conjugal transfer protein TrbE | - |
| AB188_RS01255 (AB188_01255) | 92833..93444 | - | 612 | WP_032736855 | hypothetical protein | - |
| AB188_RS01260 (AB188_01260) | 93558..95501 | - | 1944 | WP_032736856 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| AB188_RS01265 (AB188_01265) | 95498..96124 | - | 627 | WP_032736857 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| AB188_RS01270 (AB188_01270) | 96137..97096 | - | 960 | WP_088912317 | conjugal transfer pilus assembly protein TraU | traU |
| AB188_RS01275 (AB188_01275) | 97140..97766 | - | 627 | WP_042946288 | type-F conjugative transfer system protein TraW | traW |
| AB188_RS01280 (AB188_01280) | 97763..98152 | - | 390 | WP_032736860 | type-F conjugative transfer system protein TrbI | - |
| AB188_RS01285 (AB188_01285) | 98152..100791 | - | 2640 | WP_032736861 | type IV secretion system protein TraC | virb4 |
| AB188_RS01290 (AB188_01290) | 100884..101267 | - | 384 | WP_042946290 | hypothetical protein | - |
| AB188_RS01295 (AB188_01295) | 101354..101653 | - | 300 | WP_032736863 | hypothetical protein | - |
| AB188_RS29880 (AB188_01300) | 101650..102051 | - | 402 | WP_032736864 | hypothetical protein | - |
| AB188_RS01305 (AB188_01305) | 102136..102414 | - | 279 | WP_032736865 | hypothetical protein | - |
| AB188_RS27875 | 102526..103095 | - | 570 | WP_042946293 | type IV conjugative transfer system lipoprotein TraV | traV |
| AB188_RS29265 | 103115..103276 | - | 162 | WP_154235504 | hypothetical protein | - |
| AB188_RS01310 (AB188_01310) | 103269..104690 | - | 1422 | WP_032736866 | F-type conjugal transfer pilus assembly protein TraB | traB |
| AB188_RS01315 (AB188_01315) | 104690..105424 | - | 735 | WP_032736867 | type-F conjugative transfer system secretin TraK | traK |
| AB188_RS01320 (AB188_01320) | 105411..105977 | - | 567 | WP_047727553 | type IV conjugative transfer system protein TraE | traE |
| AB188_RS01325 (AB188_01325) | 105997..106302 | - | 306 | WP_032736870 | type IV conjugative transfer system protein TraL | traL |
| AB188_RS01330 (AB188_01330) | 106316..106684 | - | 369 | WP_032736871 | type IV conjugative transfer system pilin TraA | - |
| AB188_RS27880 | 106753..106953 | - | 201 | WP_060415469 | TraY domain-containing protein | - |
| AB188_RS29270 (AB188_01335) | 107038..107739 | - | 702 | WP_032736872 | hypothetical protein | - |
| AB188_RS01340 (AB188_01340) | 107978..108370 | - | 393 | WP_032736874 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| AB188_RS01345 (AB188_01345) | 108872..109279 | + | 408 | WP_080346868 | transglycosylase SLT domain-containing protein | virB1 |
| AB188_RS01350 (AB188_01350) | 109319..109849 | - | 531 | WP_047727555 | antirestriction protein | - |
| AB188_RS01355 (AB188_01355) | 110473..111306 | - | 834 | WP_009651958 | N-6 DNA methylase | - |
| AB188_RS01360 (AB188_01360) | 111356..111502 | - | 147 | WP_047727556 | hypothetical protein | - |
| AB188_RS01365 (AB188_01365) | 111596..111943 | - | 348 | WP_009651960 | hypothetical protein | - |
| AB188_RS01370 (AB188_01370) | 111996..112319 | - | 324 | WP_009651959 | hypothetical protein | - |
| AB188_RS01375 (AB188_01375) | 112340..112498 | - | 159 | WP_223240703 | hypothetical protein | - |
| AB188_RS01380 (AB188_01380) | 113170..113289 | - | 120 | WP_223156217 | type I toxin-antitoxin system Hok family toxin | - |
| AB188_RS30205 | 113234..113467 | - | 234 | WP_324294660 | DUF5431 family protein | - |
| AB188_RS27895 | 113669..114154 | - | 486 | WP_071845235 | GNAT family N-acetyltransferase | - |