T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 86399..116542
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LGM29_RS27720 (LGM29_27720) | 86399..88708 | - | 2310 | WP_009309880 | type IV conjugative transfer system coupling protein TraD | virb4 |
| LGM29_RS27725 (LGM29_27725) | 88834..89526 | - | 693 | WP_009309879 | hypothetical protein | - |
| LGM29_RS27730 (LGM29_27730) | 90261..93134 | - | 2874 | WP_009309878 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LGM29_RS27735 (LGM29_27735) | 93134..94504 | - | 1371 | WP_009309877 | conjugal transfer pilus assembly protein TraH | traH |
| LGM29_RS27740 (LGM29_27740) | 94491..94919 | - | 429 | WP_004152689 | hypothetical protein | - |
| LGM29_RS27745 (LGM29_27745) | 94912..95484 | - | 573 | WP_063160290 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LGM29_RS27750 (LGM29_27750) | 95456..95695 | - | 240 | WP_009309875 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LGM29_RS27755 (LGM29_27755) | 95706..96458 | - | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LGM29_RS27760 (LGM29_27760) | 96479..96805 | - | 327 | WP_004194451 | hypothetical protein | - |
| LGM29_RS27765 (LGM29_27765) | 96818..97066 | - | 249 | WP_004152675 | hypothetical protein | - |
| LGM29_RS27770 (LGM29_27770) | 97044..97298 | - | 255 | WP_004195500 | conjugal transfer protein TrbE | - |
| LGM29_RS27775 (LGM29_27775) | 97330..99285 | - | 1956 | WP_148866277 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LGM29_RS27780 (LGM29_27780) | 99344..99991 | - | 648 | WP_039698503 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LGM29_RS27785 (LGM29_27785) | 100135..100737 | - | 603 | WP_022631520 | hypothetical protein | - |
| LGM29_RS27790 (LGM29_27790) | 101458..102006 | - | 549 | WP_022631518 | hypothetical protein | - |
| LGM29_RS27795 (LGM29_27795) | 102021..103004 | - | 984 | WP_223176982 | conjugal transfer pilus assembly protein TraU | traU |
| LGM29_RS27800 (LGM29_27800) | 103024..103650 | - | 627 | WP_020314628 | type-F conjugative transfer system protein TraW | traW |
| LGM29_RS27805 (LGM29_27805) | 103650..104042 | - | 393 | WP_080816432 | type-F conjugative transfer system protein TrbI | - |
| LGM29_RS27810 (LGM29_27810) | 104039..106678 | - | 2640 | WP_042946320 | type IV secretion system protein TraC | virb4 |
| LGM29_RS27815 (LGM29_27815) | 106750..107148 | - | 399 | WP_074186017 | hypothetical protein | - |
| LGM29_RS27820 (LGM29_27820) | 107156..107446 | - | 291 | WP_023340940 | hypothetical protein | - |
| LGM29_RS27825 (LGM29_27825) | 107443..107847 | - | 405 | WP_042939116 | hypothetical protein | - |
| LGM29_RS27830 (LGM29_27830) | 107914..108225 | - | 312 | WP_023316403 | hypothetical protein | - |
| LGM29_RS27835 (LGM29_27835) | 108226..108444 | - | 219 | WP_023316402 | hypothetical protein | - |
| LGM29_RS27840 (LGM29_27840) | 108468..108752 | - | 285 | WP_023316401 | hypothetical protein | - |
| LGM29_RS27845 (LGM29_27845) | 108757..109167 | - | 411 | WP_020805613 | hypothetical protein | - |
| LGM29_RS27850 (LGM29_27850) | 109299..109868 | - | 570 | WP_023340942 | type IV conjugative transfer system lipoprotein TraV | traV |
| LGM29_RS27855 (LGM29_27855) | 109891..110487 | - | 597 | WP_023340943 | conjugal transfer pilus-stabilizing protein TraP | - |
| LGM29_RS27860 (LGM29_27860) | 110480..111904 | - | 1425 | WP_042946342 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LGM29_RS27865 (LGM29_27865) | 111904..112644 | - | 741 | WP_032738531 | type-F conjugative transfer system secretin TraK | traK |
| LGM29_RS27870 (LGM29_27870) | 112631..113197 | - | 567 | WP_020316627 | type IV conjugative transfer system protein TraE | traE |
| LGM29_RS27875 (LGM29_27875) | 113217..113522 | - | 306 | WP_004178059 | type IV conjugative transfer system protein TraL | traL |
| LGM29_RS27880 (LGM29_27880) | 113536..113904 | - | 369 | WP_063267011 | type IV conjugative transfer system pilin TraA | - |
| LGM29_RS27885 (LGM29_27885) | 113966..114130 | - | 165 | WP_032444506 | TraY domain-containing protein | - |
| LGM29_RS27890 (LGM29_27890) | 114322..114996 | - | 675 | WP_004197737 | hypothetical protein | - |
| LGM29_RS27895 (LGM29_27895) | 115235..115624 | - | 390 | WP_004197733 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LGM29_RS27900 (LGM29_27900) | 116057..116542 | + | 486 | WP_022631514 | transglycosylase SLT domain-containing protein | virB1 |
| LGM29_RS27905 (LGM29_27905) | 116575..116904 | - | 330 | WP_011977736 | DUF5983 family protein | - |
| LGM29_RS27910 (LGM29_27910) | 116937..117758 | - | 822 | WP_004152492 | DUF932 domain-containing protein | - |
| LGM29_RS27915 (LGM29_27915) | 118578..119411 | - | 834 | WP_004152751 | N-6 DNA methylase | - |
| LGM29_RS27920 (LGM29_27920) | 119462..119608 | - | 147 | WP_004152750 | hypothetical protein | - |
| LGM29_RS27925 (LGM29_27925) | 119703..120050 | - | 348 | WP_004152749 | hypothetical protein | - |
| LGM29_RS27930 (LGM29_27930) | 120107..120460 | - | 354 | WP_004152748 | hypothetical protein | - |
| LGM29_RS27935 (LGM29_27935) | 121090..121440 | - | 351 | WP_004153414 | hypothetical protein | - |