T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 101414..129918
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDO46_RS30530 (NUITMVR1_60300) | 98983..99382 | + | 400 | Protein_97 | hypothetical protein | - |
| LDO46_RS30535 (NUITMVR1_60310) | 100198..101019 | + | 822 | WP_032454971 | DUF932 domain-containing protein | - |
| LDO46_RS30540 (NUITMVR1_60320) | 101052..101381 | + | 330 | WP_011977736 | DUF5983 family protein | - |
| LDO46_RS30545 (NUITMVR1_60330) | 101414..101899 | - | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| LDO46_RS30550 (NUITMVR1_60340) | 102331..102714 | + | 384 | WP_224050217 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LDO46_RS30560 (NUITMVR1_60370) | 103890..104045 | + | 156 | Protein_103 | type IV conjugative transfer system pilin TraA | - |
| LDO46_RS30565 (NUITMVR1_60380) | 104059..104364 | + | 306 | WP_004178059 | type IV conjugative transfer system protein TraL | traL |
| LDO46_RS30570 (NUITMVR1_60390) | 104384..104950 | + | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| LDO46_RS30575 (NUITMVR1_60400) | 104937..105677 | + | 741 | WP_013214019 | type-F conjugative transfer system secretin TraK | traK |
| LDO46_RS30580 (NUITMVR1_60410) | 105677..107101 | + | 1425 | WP_023284634 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LDO46_RS30585 (NUITMVR1_60420) | 107215..107799 | + | 585 | WP_032441881 | type IV conjugative transfer system lipoprotein TraV | traV |
| LDO46_RS30590 (NUITMVR1_60430) | 107931..108341 | + | 411 | WP_004152499 | hypothetical protein | - |
| LDO46_RS30595 (NUITMVR1_60440) | 108447..108665 | + | 219 | WP_004195235 | hypothetical protein | - |
| LDO46_RS30600 (NUITMVR1_60450) | 108666..108977 | + | 312 | WP_004195240 | hypothetical protein | - |
| LDO46_RS30605 (NUITMVR1_60460) | 109044..109448 | + | 405 | WP_004197817 | hypothetical protein | - |
| LDO46_RS30610 (NUITMVR1_60470) | 109826..110224 | + | 399 | WP_074184101 | hypothetical protein | - |
| LDO46_RS30615 (NUITMVR1_60480) | 110296..112938 | + | 2643 | WP_032454974 | type IV secretion system protein TraC | virb4 |
| LDO46_RS30620 (NUITMVR1_60490) | 112935..113324 | + | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| LDO46_RS30625 (NUITMVR1_60500) | 113324..113959 | + | 636 | WP_032441885 | type-F conjugative transfer system protein TraW | traW |
| LDO46_RS30630 (NUITMVR1_60510) | 113994..114395 | + | 402 | WP_004194979 | hypothetical protein | - |
| LDO46_RS30635 (NUITMVR1_60520) | 114392..115381 | + | 990 | WP_057193347 | conjugal transfer pilus assembly protein TraU | traU |
| LDO46_RS30640 (NUITMVR1_60530) | 115394..116032 | + | 639 | WP_004193871 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LDO46_RS30645 (NUITMVR1_60540) | 116091..118046 | + | 1956 | WP_055316764 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LDO46_RS30650 (NUITMVR1_60550) | 118078..118332 | + | 255 | WP_224050194 | conjugal transfer protein TrbE | - |
| LDO46_RS30655 (NUITMVR1_60560) | 118310..118558 | + | 249 | WP_004152675 | hypothetical protein | - |
| LDO46_RS30660 (NUITMVR1_60570) | 118571..118897 | + | 327 | WP_004144402 | hypothetical protein | - |
| LDO46_RS30665 (NUITMVR1_60580) | 118918..119670 | + | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LDO46_RS30670 (NUITMVR1_60590) | 119681..119920 | + | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LDO46_RS30675 (NUITMVR1_60600) | 119892..120449 | + | 558 | WP_055316562 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LDO46_RS30680 (NUITMVR1_60610) | 120495..120938 | + | 444 | WP_032454976 | F-type conjugal transfer protein TrbF | - |
| LDO46_RS30685 (NUITMVR1_60620) | 120916..122295 | + | 1380 | WP_074184099 | conjugal transfer pilus assembly protein TraH | traH |
| LDO46_RS30690 (NUITMVR1_60630) | 122295..125144 | + | 2850 | WP_013609534 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LDO46_RS30695 (NUITMVR1_60640) | 125147..125680 | + | 534 | WP_014343486 | conjugal transfer protein TraS | - |
| LDO46_RS30700 (NUITMVR1_60650) | 125866..126597 | + | 732 | WP_013023830 | conjugal transfer complement resistance protein TraT | - |
| LDO46_RS30705 (NUITMVR1_60660) | 126790..127479 | + | 690 | WP_013023831 | hypothetical protein | - |
| LDO46_RS30710 (NUITMVR1_60670) | 127606..129918 | + | 2313 | WP_032454979 | type IV conjugative transfer system coupling protein TraD | virb4 |