T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 198109..223976
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDO46_RS29655 (NUITMVR1_58510) | 198109..200421 | - | 2313 | WP_032454979 | type IV conjugative transfer system coupling protein TraD | virb4 |
| LDO46_RS29660 (NUITMVR1_58520) | 200548..201237 | - | 690 | WP_013023831 | hypothetical protein | - |
| LDO46_RS29665 (NUITMVR1_58530) | 201430..202161 | - | 732 | WP_013023830 | conjugal transfer complement resistance protein TraT | - |
| LDO46_RS29670 (NUITMVR1_58540) | 202347..202880 | - | 534 | WP_014343486 | conjugal transfer protein TraS | - |
| LDO46_RS29675 (NUITMVR1_58560) | 202883..205740 | - | 2858 | Protein_198 | conjugal transfer mating-pair stabilization protein TraG | - |
| LDO46_RS29680 (NUITMVR1_58570) | 205740..207119 | - | 1380 | WP_074184099 | conjugal transfer pilus assembly protein TraH | traH |
| LDO46_RS29685 (NUITMVR1_58580) | 207097..207540 | - | 444 | WP_032454976 | F-type conjugal transfer protein TrbF | - |
| LDO46_RS29690 (NUITMVR1_58590) | 207586..208143 | - | 558 | WP_055316562 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LDO46_RS29695 (NUITMVR1_58600) | 208115..208354 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LDO46_RS29700 (NUITMVR1_58610) | 208365..209117 | - | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LDO46_RS29705 (NUITMVR1_58620) | 209138..209464 | - | 327 | WP_004144402 | hypothetical protein | - |
| LDO46_RS29710 (NUITMVR1_58630) | 209477..209725 | - | 249 | WP_004152675 | hypothetical protein | - |
| LDO46_RS29715 (NUITMVR1_58640) | 209703..209957 | - | 255 | WP_224050194 | conjugal transfer protein TrbE | - |
| LDO46_RS29720 (NUITMVR1_58650) | 209989..211944 | - | 1956 | WP_055316764 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LDO46_RS29725 (NUITMVR1_58660) | 212003..212641 | - | 639 | WP_004193871 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LDO46_RS29730 (NUITMVR1_58670) | 212654..213643 | - | 990 | WP_057193347 | conjugal transfer pilus assembly protein TraU | traU |
| LDO46_RS29735 (NUITMVR1_58680) | 213640..214041 | - | 402 | WP_004194979 | hypothetical protein | - |
| LDO46_RS29740 (NUITMVR1_58690) | 214076..214711 | - | 636 | WP_032441885 | type-F conjugative transfer system protein TraW | traW |
| LDO46_RS29745 (NUITMVR1_58700) | 214711..215100 | - | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| LDO46_RS29750 (NUITMVR1_58710) | 215097..217739 | - | 2643 | WP_032454974 | type IV secretion system protein TraC | virb4 |
| LDO46_RS29755 (NUITMVR1_58720) | 217811..218209 | - | 399 | WP_074184101 | hypothetical protein | - |
| LDO46_RS29760 (NUITMVR1_58730) | 218587..218991 | - | 405 | WP_004197817 | hypothetical protein | - |
| LDO46_RS29765 (NUITMVR1_58740) | 219058..219369 | - | 312 | WP_004195240 | hypothetical protein | - |
| LDO46_RS29770 (NUITMVR1_58750) | 219370..219588 | - | 219 | WP_004195235 | hypothetical protein | - |
| LDO46_RS29775 (NUITMVR1_58760) | 219694..220104 | - | 411 | WP_004152499 | hypothetical protein | - |
| LDO46_RS29780 (NUITMVR1_58770) | 220236..220820 | - | 585 | WP_032441881 | type IV conjugative transfer system lipoprotein TraV | traV |
| LDO46_RS29785 (NUITMVR1_58780) | 220934..222358 | - | 1425 | WP_023284634 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LDO46_RS29790 (NUITMVR1_58790) | 222358..223098 | - | 741 | WP_013214019 | type-F conjugative transfer system secretin TraK | traK |
| LDO46_RS29795 (NUITMVR1_58800) | 223085..223651 | - | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| LDO46_RS29800 (NUITMVR1_58810) | 223671..223976 | - | 306 | WP_004178059 | type IV conjugative transfer system protein TraL | traL |
| LDO46_RS29805 (NUITMVR1_58820) | 223990..224358 | - | 369 | WP_224050195 | type IV conjugative transfer system pilin TraA | - |
| LDO46_RS29810 (NUITMVR1_58830) | 224388..224567 | - | 180 | WP_224050196 | TraY domain-containing protein | - |
| LDO46_RS29815 (NUITMVR1_58840) | 224652..225353 | - | 702 | WP_032736872 | hypothetical protein | - |
| LDO46_RS29820 (NUITMVR1_58850) | 225592..225984 | - | 393 | WP_032736874 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LDO46_RS29825 (NUITMVR1_58860) | 226416..226892 | + | 477 | WP_076752132 | transglycosylase SLT domain-containing protein | - |
| LDO46_RS29830 (NUITMVR1_58870) | 226930..227460 | - | 531 | WP_076752134 | antirestriction protein | - |
| LDO46_RS29835 (NUITMVR1_58880) | 227652..227882 | + | 231 | WP_076752135 | hypothetical protein | - |
| LDO46_RS29840 (NUITMVR1_58890) | 228086..228919 | - | 834 | WP_076752137 | N-6 DNA methylase | - |