T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 219335..249349
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LB484_RS27635 (LB484_27635) | 219335..221647 | - | 2313 | WP_015065541 | type IV conjugative transfer system coupling protein TraD | virb4 |
| LB484_RS27640 (LB484_27640) | 221776..222465 | - | 690 | WP_015065540 | hypothetical protein | - |
| LB484_RS27645 (LB484_27645) | 222657..223388 | - | 732 | WP_032329926 | conjugal transfer complement resistance protein TraT | - |
| LB484_RS27650 (LB484_27650) | 223697..224221 | - | 525 | WP_015065538 | hypothetical protein | - |
| LB484_RS27655 (LB484_27655) | 224232..227075 | - | 2844 | WP_023157999 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LB484_RS27660 (LB484_27660) | 227075..228454 | - | 1380 | WP_023158000 | conjugal transfer pilus assembly protein TraH | traH |
| LB484_RS27665 (LB484_27665) | 228432..228875 | - | 444 | WP_023158001 | F-type conjugal transfer protein TrbF | - |
| LB484_RS27670 (LB484_27670) | 228921..229478 | - | 558 | WP_023158002 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LB484_RS27675 (LB484_27675) | 229450..229689 | - | 240 | WP_023158003 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LB484_RS27680 (LB484_27680) | 229700..230452 | - | 753 | WP_015065535 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LB484_RS27685 (LB484_27685) | 230473..230799 | - | 327 | WP_015065534 | hypothetical protein | - |
| LB484_RS27690 (LB484_27690) | 230812..231060 | - | 249 | WP_004152675 | hypothetical protein | - |
| LB484_RS27695 (LB484_27695) | 231038..231292 | - | 255 | WP_015065558 | conjugal transfer protein TrbE | - |
| LB484_RS27700 (LB484_27700) | 231324..233279 | - | 1956 | WP_015065533 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LB484_RS27705 (LB484_27705) | 233338..233985 | - | 648 | WP_015632510 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LB484_RS27710 (LB484_27710) | 234064..234240 | - | 177 | WP_162866177 | hypothetical protein | - |
| LB484_RS27715 (LB484_27715) | 234261..235250 | - | 990 | WP_015632509 | conjugal transfer pilus assembly protein TraU | traU |
| LB484_RS27720 (LB484_27720) | 235247..235648 | - | 402 | WP_023158005 | hypothetical protein | - |
| LB484_RS27725 (LB484_27725) | 235683..236318 | - | 636 | WP_023158006 | type-F conjugative transfer system protein TraW | traW |
| LB484_RS27730 (LB484_27730) | 236318..236707 | - | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| LB484_RS27735 (LB484_27735) | 236707..239346 | - | 2640 | WP_023158007 | type IV secretion system protein TraC | virb4 |
| LB484_RS27740 (LB484_27740) | 239418..239816 | - | 399 | WP_023158008 | hypothetical protein | - |
| LB484_RS27745 (LB484_27745) | 239824..240213 | - | 390 | WP_023158009 | hypothetical protein | - |
| LB484_RS27750 (LB484_27750) | 240256..240660 | - | 405 | WP_016831042 | hypothetical protein | - |
| LB484_RS27755 (LB484_27755) | 240727..241038 | - | 312 | WP_014386200 | hypothetical protein | - |
| LB484_RS27760 (LB484_27760) | 241039..241257 | - | 219 | WP_014386199 | hypothetical protein | - |
| LB484_RS27765 (LB484_27765) | 241281..241570 | - | 290 | Protein_256 | hypothetical protein | - |
| LB484_RS27770 (LB484_27770) | 241575..241985 | - | 411 | WP_016831039 | hypothetical protein | - |
| LB484_RS27775 (LB484_27775) | 242117..242701 | - | 585 | WP_014386196 | type IV conjugative transfer system lipoprotein TraV | traV |
| LB484_RS27780 (LB484_27780) | 242724..243320 | - | 597 | Protein_259 | conjugal transfer pilus-stabilizing protein TraP | - |
| LB484_RS27785 (LB484_27785) | 243313..244737 | - | 1425 | WP_023158013 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LB484_RS27790 (LB484_27790) | 244737..245477 | - | 741 | WP_014386193 | type-F conjugative transfer system secretin TraK | traK |
| LB484_RS27795 (LB484_27795) | 245464..246030 | - | 567 | WP_016831035 | type IV conjugative transfer system protein TraE | traE |
| LB484_RS27800 (LB484_27800) | 246050..246355 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| LB484_RS27805 (LB484_27805) | 246369..246737 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| LB484_RS27810 (LB484_27810) | 246799..247005 | - | 207 | WP_171773970 | TraY domain-containing protein | - |
| LB484_RS27815 (LB484_27815) | 247138..247857 | - | 720 | WP_016831034 | conjugal transfer protein TrbJ | - |
| LB484_RS27820 (LB484_27820) | 248057..248473 | - | 417 | WP_072145360 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LB484_RS27825 (LB484_27825) | 248864..249349 | + | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| LB484_RS27830 (LB484_27830) | 249382..249711 | - | 330 | WP_011977736 | DUF5983 family protein | - |
| LB484_RS27835 (LB484_27835) | 249744..250565 | - | 822 | WP_004182076 | DUF932 domain-containing protein | - |
| LB484_RS27840 (LB484_27840) | 251393..251956 | - | 564 | WP_004182054 | methyltransferase | - |
| LB484_RS27845 (LB484_27845) | 252004..253359 | - | 1356 | WP_004182052 | DUF3560 domain-containing protein | - |
| LB484_RS27850 (LB484_27850) | 253411..253641 | - | 231 | WP_001568051 | hypothetical protein | - |
| LB484_RS27855 (LB484_27855) | 253733..253960 | - | 228 | WP_004182050 | hypothetical protein | - |