T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 2103..30049
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LA339_RS24440 (LA339_24440) | 887..1708 | + | 822 | WP_004182076 | DUF932 domain-containing protein | - |
| LA339_RS24445 (LA339_24445) | 1741..2070 | + | 330 | WP_071996722 | DUF5983 family protein | - |
| LA339_RS24450 (LA339_24450) | 2103..2588 | - | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| LA339_RS24455 (LA339_24455) | 3023..3415 | + | 393 | WP_004206766 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LA339_RS24460 (LA339_24460) | 3622..4317 | + | 696 | WP_074187711 | transcriptional regulator TraJ family protein | - |
| LA339_RS24465 (LA339_24465) | 4401..4772 | + | 372 | WP_004208838 | TraY domain-containing protein | - |
| LA339_RS24470 (LA339_24470) | 4826..5194 | + | 369 | WP_023307550 | type IV conjugative transfer system pilin TraA | - |
| LA339_RS24475 (LA339_24475) | 5208..5513 | + | 306 | WP_004178059 | type IV conjugative transfer system protein TraL | traL |
| LA339_RS24480 (LA339_24480) | 5533..6099 | + | 567 | WP_004194424 | type IV conjugative transfer system protein TraE | traE |
| LA339_RS24485 (LA339_24485) | 6086..6826 | + | 741 | WP_004152497 | type-F conjugative transfer system secretin TraK | traK |
| LA339_RS24490 (LA339_24490) | 6826..8250 | + | 1425 | WP_032456781 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LA339_RS24495 (LA339_24495) | 8323..8892 | + | 570 | WP_032456782 | type IV conjugative transfer system lipoprotein TraV | traV |
| LA339_RS24500 (LA339_24500) | 9047..9478 | + | 432 | WP_224222654 | hypothetical protein | - |
| LA339_RS24505 (LA339_24505) | 9502..9720 | + | 219 | WP_032456783 | hypothetical protein | - |
| LA339_RS24510 (LA339_24510) | 9721..10032 | + | 312 | WP_032456784 | hypothetical protein | - |
| LA339_RS24515 (LA339_24515) | 10099..10503 | + | 405 | WP_032456785 | hypothetical protein | - |
| LA339_RS24520 (LA339_24520) | 10546..10935 | + | 390 | WP_071996724 | hypothetical protein | - |
| LA339_RS24525 (LA339_24525) | 10943..11341 | + | 399 | WP_169735290 | hypothetical protein | - |
| LA339_RS24530 (LA339_24530) | 11413..14052 | + | 2640 | WP_032456787 | type IV secretion system protein TraC | virb4 |
| LA339_RS24535 (LA339_24535) | 14052..14441 | + | 390 | WP_004152591 | type-F conjugative transfer system protein TrbI | - |
| LA339_RS24540 (LA339_24540) | 14441..15067 | + | 627 | WP_004152590 | type-F conjugative transfer system protein TraW | traW |
| LA339_RS24545 (LA339_24545) | 15111..16070 | + | 960 | WP_015065634 | conjugal transfer pilus assembly protein TraU | traU |
| LA339_RS24550 (LA339_24550) | 16083..16721 | + | 639 | WP_032456788 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LA339_RS24555 (LA339_24555) | 16780..18735 | + | 1956 | WP_032456789 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LA339_RS24560 (LA339_24560) | 18767..19003 | + | 237 | WP_032456790 | conjugal transfer protein TrbE | - |
| LA339_RS24985 | 19000..19185 | + | 186 | WP_032437912 | hypothetical protein | - |
| LA339_RS24565 (LA339_24565) | 19231..19557 | + | 327 | WP_004152685 | hypothetical protein | - |
| LA339_RS24570 (LA339_24570) | 19578..20330 | + | 753 | WP_015065637 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LA339_RS24575 (LA339_24575) | 20341..20580 | + | 240 | WP_004152687 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LA339_RS24580 (LA339_24580) | 20552..21109 | + | 558 | WP_032437911 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LA339_RS24585 (LA339_24585) | 21154..21597 | + | 444 | WP_015065638 | F-type conjugal transfer protein TrbF | - |
| LA339_RS24590 (LA339_24590) | 21575..22954 | + | 1380 | WP_011977731 | conjugal transfer pilus assembly protein TraH | traH |
| LA339_RS24595 (LA339_24595) | 22954..25776 | + | 2823 | WP_023320108 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LA339_RS24600 (LA339_24600) | 25800..26402 | + | 603 | WP_023280878 | hypothetical protein | - |
| LA339_RS24605 (LA339_24605) | 26653..27384 | + | 732 | WP_032415736 | conjugal transfer complement resistance protein TraT | - |
| LA339_RS24610 (LA339_24610) | 27746..30049 | + | 2304 | WP_032456791 | type IV conjugative transfer system coupling protein TraD | virb4 |