T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 279724..289202
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R3F78_RS01325 (R3F78_01325) | 274854..276197 | + | 1344 | WP_253575149 | IS1380-like element ISBdi2 family transposase | - |
| R3F78_RS01330 (R3F78_01330) | 276455..277057 | + | 603 | WP_028152988 | hypothetical protein | - |
| R3F78_RS01335 (R3F78_01335) | 277183..277467 | + | 285 | WP_155258061 | hypothetical protein | - |
| R3F78_RS01340 (R3F78_01340) | 278274..279722 | + | 1449 | WP_232674895 | IS4 family transposase | - |
| R3F78_RS01345 (R3F78_01345) | 279724..281031 | - | 1308 | WP_232674733 | IncP-type conjugal transfer protein TrbI | virB10 |
| R3F78_RS01350 (R3F78_01350) | 281043..281495 | - | 453 | WP_028152991 | conjugal transfer protein TrbH | - |
| R3F78_RS01355 (R3F78_01355) | 281498..282337 | - | 840 | WP_038944961 | P-type conjugative transfer protein TrbG | virB9 |
| R3F78_RS01360 (R3F78_01360) | 282355..283017 | - | 663 | WP_028152993 | conjugal transfer protein TrbF | virB8 |
| R3F78_RS01365 (R3F78_01365) | 283061..284218 | - | 1158 | WP_028152994 | P-type conjugative transfer protein TrbL | virB6 |
| R3F78_RS01370 (R3F78_01370) | 284418..285215 | - | 798 | WP_232674732 | P-type conjugative transfer protein TrbJ | virB5 |
| R3F78_RS01375 (R3F78_01375) | 285187..287562 | - | 2376 | WP_232674731 | conjugal transfer protein TrbE | virb4 |
| R3F78_RS01380 (R3F78_01380) | 287572..287871 | - | 300 | WP_232674730 | conjugal transfer protein TrbD | virB3 |
| R3F78_RS01385 (R3F78_01385) | 287864..288244 | - | 381 | WP_028152998 | TrbC/VirB2 family protein | virB2 |
| R3F78_RS01390 (R3F78_01390) | 288234..289202 | - | 969 | WP_232674729 | P-type conjugative transfer ATPase TrbB | virB11 |
| R3F78_RS01395 (R3F78_01395) | 289208..289834 | - | 627 | WP_232674728 | acyl-homoserine-lactone synthase | - |