T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 10392..46605
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9296_RS25415 (C9296_25445) | 8108..10399 | - | 2292 | WP_136756048 | F-type conjugative transfer protein TrbC | - |
| C9296_RS25420 (C9296_25450) | 10392..11462 | - | 1071 | WP_000151583 | IncI1-type conjugal transfer protein TrbB | trbB |
| C9296_RS25425 (C9296_25455) | 11481..12689 | - | 1209 | WP_061336178 | IncI1-type conjugal transfer protein TrbA | trbA |
| C9296_RS25430 (C9296_25460) | 12981..13133 | + | 153 | WP_024179514 | Hok/Gef family protein | - |
| C9296_RS25435 (C9296_25465) | 13205..13456 | - | 252 | WP_001291965 | hypothetical protein | - |
| C9296_RS27840 | 14580..14678 | + | 99 | WP_022630883 | DinQ-like type I toxin DqlB | - |
| C9296_RS26995 | 14740..14916 | - | 177 | WP_001054898 | hypothetical protein | - |
| C9296_RS25445 (C9296_25475) | 15125..15334 | - | 210 | WP_015059315 | hemolysin expression modulator Hha | - |
| C9296_RS25450 (C9296_25480) | 15432..16046 | - | 615 | WP_015059316 | plasmid IncI1-type surface exclusion protein ExcA | - |
| C9296_RS25455 (C9296_25485) | 16122..18290 | - | 2169 | WP_000698355 | IncI1-type conjugal transfer membrane protein TraY | traY |
| C9296_RS25460 (C9296_25490) | 18387..18971 | - | 585 | WP_061336176 | IncI1-type conjugal transfer protein TraX | - |
| C9296_RS25465 (C9296_25495) | 19000..20202 | - | 1203 | WP_061336175 | IncI1-type conjugal transfer protein TraW | traW |
| C9296_RS25470 (C9296_25500) | 20169..20783 | - | 615 | WP_000337399 | IncI1-type conjugal transfer protein TraV | traV |
| C9296_RS25475 (C9296_25505) | 20783..23827 | - | 3045 | WP_136756049 | IncI1-type conjugal transfer protein TraU | traU |
| C9296_RS25480 (C9296_25510) | 23917..24717 | - | 801 | WP_001493813 | IncI1-type conjugal transfer protein TraT | traT |
| C9296_RS25485 (C9296_25515) | 24701..24889 | - | 189 | WP_001277253 | putative conjugal transfer protein TraS | - |
| C9296_RS25490 (C9296_25520) | 24953..25357 | - | 405 | WP_061336173 | IncI1-type conjugal transfer protein TraR | traR |
| C9296_RS25495 (C9296_25525) | 25409..25936 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| C9296_RS25500 (C9296_25530) | 25936..26640 | - | 705 | WP_061336172 | IncI1-type conjugal transfer protein TraP | traP |
| C9296_RS25505 (C9296_25535) | 26640..27929 | - | 1290 | WP_061336171 | conjugal transfer protein TraO | traO |
| C9296_RS25510 (C9296_25540) | 27932..28915 | - | 984 | WP_001191877 | IncI1-type conjugal transfer protein TraN | traN |
| C9296_RS25515 (C9296_25545) | 28926..29618 | - | 693 | WP_000138551 | DotI/IcmL family type IV secretion protein | traM |
| C9296_RS25520 (C9296_25550) | 29615..29962 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| C9296_RS25525 (C9296_25555) | 29980..33747 | - | 3768 | WP_061336170 | LPD7 domain-containing protein | - |
| C9296_RS25530 (C9296_25560) | 33837..34388 | - | 552 | WP_047666746 | phospholipase D family protein | - |
| C9296_RS25535 (C9296_25565) | 34403..34693 | - | 291 | WP_001314267 | hypothetical protein | traK |
| C9296_RS25540 (C9296_25570) | 34690..35838 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| C9296_RS25545 (C9296_25575) | 35835..36653 | - | 819 | WP_021555364 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| C9296_RS25550 (C9296_25580) | 36650..37108 | - | 459 | WP_061336168 | IncI1-type conjugal transfer lipoprotein TraH | - |
| C9296_RS25555 (C9296_25585) | 37503..38087 | - | 585 | WP_000977523 | histidine phosphatase family protein | - |
| C9296_RS25560 (C9296_25590) | 38147..39349 | - | 1203 | WP_061336167 | conjugal transfer protein TraF | - |
| C9296_RS25565 (C9296_25595) | 39435..40259 | - | 825 | WP_001238935 | conjugal transfer protein TraE | traE |
| C9296_RS27975 | 40410..40502 | - | 93 | Protein_42 | shufflon-specific DNA recombinase | - |
| C9296_RS25575 (C9296_25605) | 40506..40763 | + | 258 | Protein_43 | transposase | - |
| C9296_RS25580 (C9296_25610) | 40820..42112 | - | 1293 | WP_001619585 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| C9296_RS25585 (C9296_25615) | 42112..42768 | - | 657 | WP_001401940 | A24 family peptidase | - |
| C9296_RS25590 (C9296_25620) | 42753..43313 | - | 561 | WP_061336166 | lytic transglycosylase domain-containing protein | virB1 |
| C9296_RS25595 (C9296_25625) | 43323..43937 | - | 615 | WP_061336165 | type 4 pilus major pilin | - |
| C9296_RS25600 (C9296_25630) | 43954..45039 | - | 1086 | WP_061336164 | type II secretion system F family protein | - |
| C9296_RS25605 (C9296_25635) | 45052..46605 | - | 1554 | WP_061336163 | ATPase, T2SS/T4P/T4SS family | virB11 |
| C9296_RS25610 (C9296_25640) | 46616..47068 | - | 453 | WP_001247333 | type IV pilus biogenesis protein PilP | - |
| C9296_RS25615 (C9296_25645) | 47055..48350 | - | 1296 | WP_061336162 | type 4b pilus protein PilO2 | - |
| C9296_RS25620 (C9296_25650) | 48343..50025 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| C9296_RS25625 (C9296_25655) | 50039..50476 | - | 438 | WP_061336161 | type IV pilus biogenesis protein PilM | - |
| C9296_RS25630 (C9296_25660) | 50476..51543 | - | 1068 | WP_061336160 | type IV pilus biogenesis lipoprotein PilL | - |