T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 7205..38870
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9006_RS25795 (C9006_25825) | 4921..7212 | - | 2292 | WP_001289271 | F-type conjugative transfer protein TrbC | - |
| C9006_RS25800 (C9006_25830) | 7205..8275 | - | 1071 | WP_000151575 | IncI1-type conjugal transfer protein TrbB | trbB |
| C9006_RS25805 (C9006_25835) | 8294..9502 | - | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| C9006_RS25810 (C9006_25840) | 9794..9946 | + | 153 | WP_001303307 | Hok/Gef family protein | - |
| C9006_RS25815 (C9006_25845) | 10018..10269 | - | 252 | WP_001291965 | hypothetical protein | - |
| C9006_RS25820 (C9006_25850) | 10630..11412 | - | 783 | WP_001300609 | IS21-like element IS100kyp family helper ATPase IstB | - |
| C9006_RS25825 (C9006_25855) | 11409..12431 | - | 1023 | WP_001572805 | IS21-like element IS100 family transposase | - |
| C9006_RS26460 | 13152..13328 | - | 177 | WP_001054900 | hypothetical protein | - |
| C9006_RS25840 (C9006_25870) | 13720..13929 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| C9006_RS25845 (C9006_25875) | 14001..14663 | - | 663 | WP_000644794 | plasmid IncI1-type surface exclusion protein ExcA | - |
| C9006_RS25850 (C9006_25880) | 14734..16902 | - | 2169 | WP_000698368 | DotA/TraY family protein | traY |
| C9006_RS25855 (C9006_25885) | 16999..17583 | - | 585 | WP_001037998 | conjugal transfer protein TraX | - |
| C9006_RS25860 (C9006_25890) | 17612..18814 | - | 1203 | WP_001189158 | IncI1-type conjugal transfer protein TraW | traW |
| C9006_RS25865 (C9006_25895) | 18781..19395 | - | 615 | WP_000337394 | IncI1-type conjugal transfer protein TraV | traV |
| C9006_RS25870 (C9006_25900) | 19395..22439 | - | 3045 | WP_001024751 | IncI1-type conjugal transfer protein TraU | traU |
| C9006_RS25875 (C9006_25905) | 22529..23329 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| C9006_RS25880 (C9006_25910) | 23313..23501 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| C9006_RS25885 (C9006_25915) | 23565..23969 | - | 405 | WP_000086960 | IncI1-type conjugal transfer protein TraR | traR |
| C9006_RS25890 (C9006_25920) | 24020..24547 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| C9006_RS25895 (C9006_25925) | 24547..25251 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| C9006_RS25900 (C9006_25930) | 25251..26540 | - | 1290 | WP_001271997 | conjugal transfer protein TraO | traO |
| C9006_RS25905 (C9006_25935) | 26543..27526 | - | 984 | WP_001191878 | IncI1-type conjugal transfer protein TraN | traN |
| C9006_RS25910 (C9006_25940) | 27537..28229 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| C9006_RS25915 (C9006_25945) | 28226..28573 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| C9006_RS25920 (C9006_25950) | 28591..32358 | - | 3768 | WP_001141535 | LPD7 domain-containing protein | - |
| C9006_RS25925 (C9006_25955) | 32448..32999 | - | 552 | WP_000014584 | phospholipase D family protein | - |
| C9006_RS25930 (C9006_25960) | 33014..33304 | - | 291 | WP_001299214 | hypothetical protein | traK |
| C9006_RS25935 (C9006_25965) | 33301..34449 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| C9006_RS25940 (C9006_25970) | 34446..35264 | - | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| C9006_RS25945 (C9006_25975) | 35261..35719 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| C9006_RS25950 (C9006_25980) | 36114..36698 | - | 585 | WP_000977517 | histidine phosphatase family protein | - |
| C9006_RS25955 (C9006_25985) | 36758..37960 | - | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| C9006_RS25960 (C9006_25990) | 38046..38870 | - | 825 | WP_001238927 | conjugal transfer protein TraE | traE |
| C9006_RS25965 (C9006_25995) | 39021..40175 | - | 1155 | WP_001139958 | site-specific integrase | - |