T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 46607..72539
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HL854_RS26945 (HL854_27320) | 46607..48898 | - | 2292 | WP_228722999 | type IV conjugative transfer system coupling protein TraD | virb4 |
| HL854_RS27570 | 48972..49067 | - | 96 | Protein_43 | hypothetical protein | - |
| HL854_RS26950 (HL854_27325) | 49260..49991 | - | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| HL854_RS26955 (HL854_27330) | 50181..50708 | - | 528 | WP_047665858 | conjugal transfer protein TraS | - |
| HL854_RS26960 (HL854_27335) | 50714..53563 | - | 2850 | WP_173818511 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HL854_RS26965 (HL854_27340) | 53563..54933 | - | 1371 | WP_047665852 | conjugal transfer pilus assembly protein TraH | traH |
| HL854_RS26970 (HL854_27345) | 54920..55342 | - | 423 | WP_049010971 | hypothetical protein | - |
| HL854_RS26975 (HL854_27350) | 55335..55907 | - | 573 | WP_055323574 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HL854_RS26980 (HL854_27355) | 55879..56118 | - | 240 | WP_009309875 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HL854_RS26985 (HL854_27360) | 56129..56881 | - | 753 | WP_047665849 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HL854_RS26990 (HL854_27365) | 56902..57228 | - | 327 | WP_012539967 | hypothetical protein | - |
| HL854_RS26995 (HL854_27370) | 57239..57466 | - | 228 | WP_047665846 | conjugal transfer protein TrbE | - |
| HL854_RS27000 (HL854_27375) | 57456..57737 | - | 282 | WP_047665844 | hypothetical protein | - |
| HL854_RS27005 (HL854_27380) | 57770..59725 | - | 1956 | WP_065908465 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HL854_RS27010 (HL854_27385) | 59784..60422 | - | 639 | WP_047667531 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HL854_RS27015 (HL854_27390) | 60435..61424 | - | 990 | WP_046622837 | conjugal transfer pilus assembly protein TraU | traU |
| HL854_RS27020 (HL854_27395) | 61421..61810 | - | 390 | WP_047667530 | hypothetical protein | - |
| HL854_RS27025 (HL854_27400) | 61852..62478 | - | 627 | WP_004152507 | type-F conjugative transfer system protein TraW | traW |
| HL854_RS27030 (HL854_27405) | 62478..62867 | - | 390 | WP_046622835 | type-F conjugative transfer system protein TrbI | - |
| HL854_RS27035 (HL854_27410) | 62867..65506 | - | 2640 | WP_046622834 | type IV secretion system protein TraC | virb4 |
| HL854_RS27040 (HL854_27415) | 65578..65976 | - | 399 | WP_004153071 | hypothetical protein | - |
| HL854_RS27575 | 65984..66226 | - | 243 | WP_074446773 | hypothetical protein | - |
| HL854_RS27050 (HL854_27425) | 66418..66822 | - | 405 | WP_065907749 | hypothetical protein | - |
| HL854_RS27055 (HL854_27430) | 66889..67200 | - | 312 | WP_047665766 | hypothetical protein | - |
| HL854_RS27060 (HL854_27435) | 67201..67419 | - | 219 | WP_014386199 | hypothetical protein | - |
| HL854_RS27065 (HL854_27440) | 67443..67733 | - | 291 | WP_047665765 | hypothetical protein | - |
| HL854_RS27580 | 67762..68160 | - | 399 | WP_223170083 | hypothetical protein | - |
| HL854_RS27075 (HL854_27450) | 68316..68885 | - | 570 | WP_046622829 | type IV conjugative transfer system lipoprotein TraV | traV |
| HL854_RS27080 (HL854_27455) | 68908..69504 | - | 597 | WP_047665764 | conjugal transfer pilus-stabilizing protein TraP | - |
| HL854_RS27085 (HL854_27460) | 69497..70921 | - | 1425 | WP_046622826 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HL854_RS27090 (HL854_27465) | 70921..71661 | - | 741 | WP_013214019 | type-F conjugative transfer system secretin TraK | traK |
| HL854_RS27095 (HL854_27470) | 71648..72214 | - | 567 | WP_047665763 | type IV conjugative transfer system protein TraE | traE |
| HL854_RS27100 (HL854_27475) | 72234..72539 | - | 306 | WP_004178059 | type IV conjugative transfer system protein TraL | traL |
| HL854_RS27105 (HL854_27480) | 72553..72921 | - | 369 | WP_173818512 | type IV conjugative transfer system pilin TraA | - |
| HL854_RS27110 (HL854_27485) | 72975..73346 | - | 372 | WP_071885111 | TraY domain-containing protein | - |
| HL854_RS27115 (HL854_27490) | 73430..74125 | - | 696 | WP_072194100 | transcriptional regulator TraJ family protein | - |
| HL854_RS27120 (HL854_27495) | 74332..74724 | - | 393 | WP_047665760 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HL854_RS27125 (HL854_27500) | 75231..75638 | + | 408 | WP_223170089 | transglycosylase SLT domain-containing protein | - |
| HL854_RS27130 (HL854_27505) | 75676..76206 | - | 531 | WP_065907732 | antirestriction protein | - |