T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 138763..162278
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FR848_RS30750 | 134802..134972 | - | 171 | WP_162933663 | hypothetical protein | - |
| FR848_RS29900 (FR848_29910) | 135165..135707 | + | 543 | WP_040118470 | antirestriction protein | - |
| FR848_RS29905 (FR848_29915) | 135730..136152 | - | 423 | WP_051800693 | transglycosylase SLT domain-containing protein | - |
| FR848_RS29910 (FR848_29920) | 136657..137049 | + | 393 | WP_020804860 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| FR848_RS29915 (FR848_29925) | 137287..137979 | + | 693 | WP_032426082 | conjugal transfer protein TrbJ | - |
| FR848_RS29920 (FR848_29930) | 138154..138318 | + | 165 | WP_032426810 | TraY domain-containing protein | - |
| FR848_RS29925 (FR848_29935) | 138381..138749 | + | 369 | WP_040118418 | type IV conjugative transfer system pilin TraA | - |
| FR848_RS29930 (FR848_29940) | 138763..139068 | + | 306 | WP_020323523 | type IV conjugative transfer system protein TraL | traL |
| FR848_RS29935 (FR848_29945) | 139088..139654 | + | 567 | WP_040118472 | type IV conjugative transfer system protein TraE | traE |
| FR848_RS29940 (FR848_29950) | 139641..140381 | + | 741 | WP_040118473 | type-F conjugative transfer system secretin TraK | traK |
| FR848_RS29945 (FR848_29955) | 140381..141796 | + | 1416 | WP_040118474 | F-type conjugal transfer pilus assembly protein TraB | traB |
| FR848_RS29950 (FR848_29960) | 141789..142385 | + | 597 | WP_117146400 | conjugal transfer protein TraP | - |
| FR848_RS29960 (FR848_29970) | 142625..143206 | + | 582 | WP_040118475 | type IV conjugative transfer system lipoprotein TraV | traV |
| FR848_RS29965 (FR848_29975) | 143353..143556 | + | 204 | WP_020315141 | hypothetical protein | - |
| FR848_RS29970 (FR848_29980) | 143797..144210 | + | 414 | WP_040118476 | hypothetical protein | - |
| FR848_RS29975 (FR848_29985) | 144239..144538 | + | 300 | WP_040118477 | hypothetical protein | - |
| FR848_RS29980 (FR848_29990) | 144555..144779 | + | 225 | WP_040118478 | hypothetical protein | - |
| FR848_RS29985 (FR848_29995) | 144776..145180 | + | 405 | WP_040118479 | hypothetical protein | - |
| FR848_RS29990 (FR848_30000) | 145313..147952 | + | 2640 | WP_040118480 | type IV secretion system protein TraC | virb4 |
| FR848_RS29995 (FR848_30005) | 147985..148386 | + | 402 | WP_051800694 | type-F conjugative transfer system protein TrbI | - |
| FR848_RS30000 (FR848_30010) | 148383..149009 | + | 627 | WP_040118481 | type-F conjugative transfer system protein TraW | traW |
| FR848_RS30005 (FR848_30015) | 149029..150012 | + | 984 | WP_074423225 | conjugal transfer pilus assembly protein TraU | traU |
| FR848_RS30010 (FR848_30020) | 150025..150642 | + | 618 | WP_040118483 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| FR848_RS30015 (FR848_30025) | 150639..152519 | + | 1881 | WP_040118484 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| FR848_RS30020 (FR848_30030) | 152557..152838 | + | 282 | WP_040118485 | hypothetical protein | - |
| FR848_RS30025 (FR848_30035) | 152828..153055 | + | 228 | WP_040118486 | conjugal transfer protein TrbE | - |
| FR848_RS30030 (FR848_30040) | 153066..153392 | + | 327 | WP_040118487 | hypothetical protein | - |
| FR848_RS30035 (FR848_30045) | 153411..154163 | + | 753 | WP_040118488 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| FR848_RS30040 (FR848_30050) | 154174..154413 | + | 240 | WP_040118489 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FR848_RS30045 (FR848_30055) | 154385..154960 | + | 576 | WP_040118490 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| FR848_RS30050 (FR848_30060) | 154947..156317 | + | 1371 | WP_040118491 | conjugal transfer pilus assembly protein TraH | traH |
| FR848_RS30055 (FR848_30065) | 156317..159190 | + | 2874 | WP_040118492 | conjugal transfer mating-pair stabilization protein TraG | traG |
| FR848_RS30060 (FR848_30070) | 159201..159734 | + | 534 | WP_040118493 | hypothetical protein | - |
| FR848_RS30065 (FR848_30075) | 159978..162278 | + | 2301 | WP_040118494 | type IV conjugative transfer system coupling protein TraD | virb4 |