T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 52453..78091
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTH47_RS00315 | 52453..54645 | - | 2193 | WP_100663239 | type IV conjugative transfer system coupling protein TraD | virb4 |
| HTH47_RS00320 | 55017..55748 | - | 732 | WP_059514045 | conjugal transfer complement resistance protein TraT | - |
| HTH47_RS00325 | 55823..56254 | - | 432 | WP_059514050 | hypothetical protein | - |
| HTH47_RS00330 | 56271..59134 | - | 2864 | Protein_65 | conjugal transfer mating-pair stabilization protein TraG | - |
| HTH47_RS00335 | 59134..60504 | - | 1371 | WP_059514056 | conjugal transfer pilus assembly protein TraH | traH |
| HTH47_RS00340 | 60491..60919 | - | 429 | WP_129468605 | conjugal transfer protein TrbF | - |
| HTH47_RS00345 | 60912..61466 | - | 555 | WP_025759806 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HTH47_RS00350 | 61515..61703 | - | 189 | WP_228717230 | hypothetical protein | - |
| HTH47_RS00355 | 61720..62463 | - | 744 | WP_071667457 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HTH47_RS00360 | 62500..62688 | - | 189 | WP_100663241 | hypothetical protein | - |
| HTH47_RS00365 | 62720..64574 | - | 1855 | Protein_72 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HTH47_RS00370 | 64571..65200 | - | 630 | WP_100663243 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HTH47_RS00375 | 65216..66153 | - | 938 | Protein_74 | conjugal transfer pilus assembly protein TraU | - |
| HTH47_RS00380 | 66203..66850 | - | 648 | WP_025759814 | type-F conjugative transfer system protein TraW | traW |
| HTH47_RS00385 | 66850..67197 | - | 348 | WP_011201813 | type-F conjugative transfer system protein TrbI | - |
| HTH47_RS00390 | 67194..69824 | - | 2631 | WP_025759816 | type IV secretion system protein TraC | virb4 |
| HTH47_RS00395 | 69855..70382 | - | 528 | WP_228717231 | conjugal transfer pilus-stabilizing protein TraP | - |
| HTH47_RS00400 | 70372..70776 | - | 405 | WP_058670650 | hypothetical protein | - |
| HTH47_RS00405 | 70760..70945 | - | 186 | WP_016674194 | hypothetical protein | - |
| HTH47_RS00410 | 70949..71173 | - | 225 | WP_058670649 | TraR/DksA C4-type zinc finger protein | - |
| HTH47_RS00415 | 71293..71832 | - | 540 | WP_025759821 | type IV conjugative transfer system lipoprotein TraV | traV |
| HTH47_RS00420 | 71854..73248 | - | 1395 | WP_058670648 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HTH47_RS00425 | 73235..73978 | - | 744 | WP_100663244 | type-F conjugative transfer system secretin TraK | traK |
| HTH47_RS00430 | 73965..74531 | - | 567 | WP_025759824 | type IV conjugative transfer system protein TraE | traE |
| HTH47_RS00435 | 74546..74851 | - | 306 | WP_008324160 | type IV conjugative transfer system protein TraL | traL |
| HTH47_RS00440 | 75001..75351 | - | 351 | WP_071667438 | type IV conjugative transfer system pilin TraA | - |
| HTH47_RS00445 | 75417..75842 | - | 426 | WP_323829697 | TraY domain-containing protein | - |
| HTH47_RS00450 | 75900..76397 | - | 498 | WP_181368378 | hypothetical protein | - |
| HTH47_RS00455 | 76394..76603 | - | 210 | WP_181368379 | hypothetical protein | - |
| HTH47_RS00460 | 76788..77183 | - | 396 | WP_040218546 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HTH47_RS00465 | 77615..78091 | + | 477 | WP_008324168 | transglycosylase SLT domain-containing protein | virB1 |
| HTH47_RS00470 | 78138..78668 | - | 531 | WP_100663245 | antirestriction protein | - |
| HTH47_RS00475 | 79295..80125 | - | 831 | WP_025760338 | N-6 DNA methylase | - |
| HTH47_RS00480 | 80168..80431 | - | 264 | WP_008324174 | hypothetical protein | - |
| HTH47_RS00485 | 80517..80861 | - | 345 | WP_016582953 | hypothetical protein | - |
| HTH47_RS00550 | 80908..81093 | - | 186 | WP_181368377 | hypothetical protein | - |
| HTH47_RS00495 | 81370..81657 | - | 288 | WP_228717233 | hypothetical protein | - |
| HTH47_RS00500 | 82253..82648 | - | 396 | WP_181368380 | hypothetical protein | - |
| HTH47_RS00505 | 82710..83033 | - | 324 | WP_057069613 | hypothetical protein | - |