T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 23874..44724
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HK44_RS28440 (HK44_029140) | 19839..20585 | + | 747 | WP_080690697 | hypothetical protein | - |
| HK44_RS28445 (HK44_029145) | 20776..20913 | + | 138 | WP_206756135 | hypothetical protein | - |
| HK44_RS28450 (HK44_029150) | 21058..21474 | + | 417 | WP_011117398 | hypothetical protein | - |
| HK44_RS28455 (HK44_029155) | 21575..22834 | - | 1260 | WP_011117397 | site-specific integrase | - |
| HK44_RS28460 (HK44_029160) | 22831..23238 | - | 408 | WP_011117396 | hypothetical protein | - |
| HK44_RS28465 (HK44_029170) | 23874..25484 | + | 1611 | WP_228409389 | Y-family DNA polymerase | traN |
| HK44_RS28470 (HK44_029175) | 25481..25876 | - | 396 | WP_011117394 | hypothetical protein | - |
| HK44_RS30050 | 25920..27188 | - | 1269 | Protein_29 | DUF1173 family protein | - |
| HK44_RS30335 | 27347..27535 | - | 189 | WP_052014790 | hypothetical protein | - |
| HK44_RS28490 (HK44_029200) | 27988..28749 | - | 762 | WP_011117390 | hypothetical protein | - |
| HK44_RS28495 (HK44_029205) | 28789..29358 | - | 570 | WP_011117389 | replication protein | - |
| HK44_RS28500 (HK44_029210) | 29806..30435 | - | 630 | WP_011117388 | recombinase family protein | - |
| HK44_RS28505 (HK44_029215) | 30703..31023 | - | 321 | WP_012727769 | hypothetical protein | - |
| HK44_RS28510 (HK44_029225) | 31124..31429 | - | 306 | WP_011117387 | hypothetical protein | - |
| HK44_RS28515 (HK44_029230) | 31434..31775 | - | 342 | WP_011117386 | TrfB-related DNA-binding protein | - |
| HK44_RS28520 (HK44_029235) | 31772..32698 | - | 927 | WP_011117385 | ParB/RepB/Spo0J family partition protein | - |
| HK44_RS28525 (HK44_029240) | 32712..33485 | - | 774 | WP_019694514 | ParA family protein | - |
| HK44_RS28530 (HK44_029250) | 34423..34884 | + | 462 | WP_011117467 | TrbC/VirB2 family protein | virB2 |
| HK44_RS28535 | 34888..35181 | + | 294 | WP_011117466 | VirB3 family type IV secretion system protein | virB3 |
| HK44_RS28540 (HK44_029255) | 35210..37852 | + | 2643 | WP_019694561 | hypothetical protein | virb4 |
| HK44_RS28545 (HK44_029260) | 37849..38538 | + | 690 | WP_011117464 | type IV secretion system protein | virB5 |
| HK44_RS28550 (HK44_029265) | 38566..38778 | + | 213 | WP_011117463 | hypothetical protein | - |
| HK44_RS28555 (HK44_029270) | 38771..39175 | + | 405 | WP_011117462 | hypothetical protein | - |
| HK44_RS28560 (HK44_029275) | 39163..40026 | + | 864 | WP_011117461 | type IV secretion system protein | virB6 |
| HK44_RS28565 (HK44_029280) | 40030..40695 | + | 666 | WP_011117460 | type IV secretion system protein | virB8 |
| HK44_RS28570 (HK44_029285) | 40720..41511 | + | 792 | WP_011117459 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| HK44_RS28575 (HK44_029290) | 41514..42797 | + | 1284 | WP_011117458 | TrbI/VirB10 family protein | virB10 |
| HK44_RS28580 (HK44_029295) | 42807..43835 | + | 1029 | WP_011117457 | P-type DNA transfer ATPase VirB11 | virB11 |
| HK44_RS28585 (HK44_029300) | 43819..44724 | + | 906 | WP_011117456 | lytic transglycosylase domain-containing protein | virB1 |
| HK44_RS28590 (HK44_029305) | 44754..45083 | + | 330 | WP_011117455 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| HK44_RS28595 (HK44_029310) | 45073..45678 | + | 606 | WP_011117454 | phospholipase D family protein | - |
| HK44_RS28600 (HK44_029315) | 45693..46175 | + | 483 | WP_011117453 | hypothetical protein | - |
| HK44_RS28605 (HK44_029320) | 46223..46861 | + | 639 | WP_011117452 | hypothetical protein | - |
| HK44_RS28610 (HK44_029325) | 47190..47771 | - | 582 | WP_011117451 | hypothetical protein | - |