T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1313..31019
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F1E45_RS21760 (F1E45_21975) | 8..1162 | + | 1155 | WP_001139958 | site-specific integrase | - |
| F1E45_RS21765 (F1E45_21980) | 1313..2137 | + | 825 | WP_001238927 | conjugal transfer protein TraE | traE |
| F1E45_RS21770 (F1E45_21985) | 2223..3425 | + | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| F1E45_RS21775 (F1E45_21990) | 3485..4069 | + | 585 | WP_000977517 | histidine phosphatase family protein | - |
| F1E45_RS21780 (F1E45_21995) | 4464..4922 | + | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| F1E45_RS21785 (F1E45_22000) | 4919..5737 | + | 819 | WP_130570434 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| F1E45_RS21790 (F1E45_22005) | 5734..6882 | + | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| F1E45_RS21795 (F1E45_22010) | 6879..7169 | + | 291 | WP_001299214 | hypothetical protein | traK |
| F1E45_RS21800 (F1E45_22015) | 7184..7735 | + | 552 | WP_000014584 | phospholipase D family protein | - |
| F1E45_RS21805 (F1E45_22020) | 7825..11592 | + | 3768 | WP_001141535 | LPD7 domain-containing protein | - |
| F1E45_RS21810 (F1E45_22025) | 11610..11957 | + | 348 | WP_001055900 | conjugal transfer protein | traL |
| F1E45_RS21815 (F1E45_22030) | 11954..12646 | + | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| F1E45_RS21820 (F1E45_22035) | 12657..13640 | + | 984 | WP_001191878 | IncI1-type conjugal transfer protein TraN | traN |
| F1E45_RS21825 (F1E45_22040) | 13643..14932 | + | 1290 | WP_001271997 | conjugal transfer protein TraO | traO |
| F1E45_RS21830 (F1E45_22045) | 14932..15636 | + | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| F1E45_RS21835 (F1E45_22050) | 15636..16163 | + | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| F1E45_RS21840 (F1E45_22055) | 16214..16618 | + | 405 | WP_000086960 | IncI1-type conjugal transfer protein TraR | traR |
| F1E45_RS21845 (F1E45_22060) | 16682..16870 | + | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| F1E45_RS21850 (F1E45_22065) | 16854..17654 | + | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| F1E45_RS21855 (F1E45_22070) | 17744..20788 | + | 3045 | WP_001024752 | IncI1-type conjugal transfer protein TraU | traU |
| F1E45_RS21860 (F1E45_22075) | 20788..21402 | + | 615 | WP_000337394 | IncI1-type conjugal transfer protein TraV | traV |
| F1E45_RS21865 (F1E45_22080) | 21369..22571 | + | 1203 | WP_001189158 | IncI1-type conjugal transfer protein TraW | traW |
| F1E45_RS21870 (F1E45_22085) | 22600..23184 | + | 585 | WP_001037998 | conjugal transfer protein TraX | - |
| F1E45_RS21875 (F1E45_22090) | 23281..25449 | + | 2169 | WP_000698368 | DotA/TraY family protein | traY |
| F1E45_RS21880 (F1E45_22095) | 25520..26182 | + | 663 | WP_000644794 | plasmid IncI1-type surface exclusion protein ExcA | - |
| F1E45_RS21885 (F1E45_22100) | 26254..26463 | - | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| F1E45_RS23225 | 26855..27031 | + | 177 | WP_001054900 | hypothetical protein | - |
| F1E45_RS21890 (F1E45_22115) | 27955..28206 | + | 252 | WP_001291965 | hypothetical protein | - |
| F1E45_RS21895 (F1E45_22120) | 28278..28430 | - | 153 | WP_001303307 | Hok/Gef family protein | - |
| F1E45_RS21900 (F1E45_22125) | 28722..29930 | + | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| F1E45_RS21905 (F1E45_22130) | 29949..31019 | + | 1071 | WP_000151575 | IncI1-type conjugal transfer protein TrbB | trbB |
| F1E45_RS21910 (F1E45_22135) | 31012..33303 | + | 2292 | WP_001289271 | F-type conjugative transfer protein TrbC | - |