T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1495..30102
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AFK73_RS25770 (AFK73_25870) | 279..1100 | + | 822 | WP_004152492 | DUF932 domain-containing protein | - |
| AFK73_RS30335 | 1133..1462 | + | 330 | WP_011977736 | DUF5983 family protein | - |
| AFK73_RS25775 (AFK73_25875) | 1495..1980 | - | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| AFK73_RS25780 (AFK73_25880) | 2414..2806 | + | 393 | WP_004178062 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| AFK73_RS30340 | 3020..3715 | + | 696 | WP_004178061 | transcriptional regulator TraJ family protein | - |
| AFK73_RS25790 (AFK73_25890) | 3799..4170 | + | 372 | WP_004208838 | TraY domain-containing protein | - |
| AFK73_RS25795 (AFK73_25895) | 4224..4592 | + | 369 | WP_004178060 | type IV conjugative transfer system pilin TraA | - |
| AFK73_RS25800 (AFK73_25900) | 4606..4911 | + | 306 | WP_004178059 | type IV conjugative transfer system protein TraL | traL |
| AFK73_RS25805 (AFK73_25905) | 4931..5497 | + | 567 | WP_004152602 | type IV conjugative transfer system protein TraE | traE |
| AFK73_RS25810 (AFK73_25910) | 5484..6224 | + | 741 | WP_004152601 | type-F conjugative transfer system secretin TraK | traK |
| AFK73_RS25815 (AFK73_25915) | 6224..7648 | + | 1425 | WP_004152600 | F-type conjugal transfer pilus assembly protein TraB | traB |
| AFK73_RS25820 (AFK73_25920) | 7641..8237 | + | 597 | WP_004152599 | conjugal transfer pilus-stabilizing protein TraP | - |
| AFK73_RS25825 (AFK73_25925) | 8260..8829 | + | 570 | WP_004152598 | type IV conjugative transfer system lipoprotein TraV | traV |
| AFK73_RS25830 (AFK73_25930) | 8961..9371 | + | 411 | WP_004152597 | lipase chaperone | - |
| AFK73_RS31025 (AFK73_25935) | 9376..9666 | + | 291 | WP_032423381 | hypothetical protein | - |
| AFK73_RS25840 (AFK73_25940) | 9690..9908 | + | 219 | WP_004171484 | hypothetical protein | - |
| AFK73_RS25845 (AFK73_25945) | 9909..10247 | + | 339 | WP_032436750 | hypothetical protein | - |
| AFK73_RS25850 (AFK73_25950) | 10292..10696 | + | 405 | WP_023307543 | hypothetical protein | - |
| AFK73_RS25855 (AFK73_25955) | 10693..10983 | + | 291 | WP_023307542 | hypothetical protein | - |
| AFK73_RS25860 (AFK73_25960) | 10991..11389 | + | 399 | WP_072158599 | hypothetical protein | - |
| AFK73_RS25865 (AFK73_25965) | 11461..14100 | + | 2640 | WP_016528865 | type IV secretion system protein TraC | virb4 |
| AFK73_RS25870 (AFK73_25970) | 14100..14489 | + | 390 | WP_032436749 | type-F conjugative transfer system protein TrbI | - |
| AFK73_RS25875 (AFK73_25975) | 14489..15115 | + | 627 | WP_023307538 | type-F conjugative transfer system protein TraW | traW |
| AFK73_RS25880 (AFK73_25980) | 15159..16118 | + | 960 | WP_015065634 | conjugal transfer pilus assembly protein TraU | traU |
| AFK73_RS25885 (AFK73_25985) | 16131..16769 | + | 639 | WP_015065635 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| AFK73_RS25890 (AFK73_25990) | 16828..18783 | + | 1956 | WP_057775023 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| AFK73_RS25895 (AFK73_25995) | 18815..19051 | + | 237 | WP_032436746 | conjugal transfer protein TrbE | - |
| AFK73_RS32860 (AFK73_26000) | 19048..19233 | + | 186 | WP_032436745 | hypothetical protein | - |
| AFK73_RS25905 (AFK73_26005) | 19279..19605 | + | 327 | WP_032436744 | hypothetical protein | - |
| AFK73_RS25910 (AFK73_26010) | 19626..20378 | + | 753 | WP_015065637 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| AFK73_RS25915 (AFK73_26015) | 20389..20628 | + | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| AFK73_RS25920 (AFK73_26020) | 20600..21157 | + | 558 | WP_004152678 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| AFK73_RS25925 (AFK73_26025) | 21202..21645 | + | 444 | WP_032436741 | F-type conjugal transfer protein TrbF | - |
| AFK73_RS25930 (AFK73_26030) | 21623..23002 | + | 1380 | WP_072158600 | conjugal transfer pilus assembly protein TraH | traH |
| AFK73_RS25935 (AFK73_26035) | 23002..25824 | + | 2823 | WP_023320108 | conjugal transfer mating-pair stabilization protein TraG | traG |
| AFK73_RS25940 (AFK73_26040) | 25848..26450 | + | 603 | WP_023280878 | hypothetical protein | - |
| AFK73_RS25945 (AFK73_26045) | 26702..27433 | + | 732 | WP_032415736 | conjugal transfer complement resistance protein TraT | - |
| AFK73_RS32640 | 27624..27737 | + | 114 | Protein_37 | hypothetical protein | - |
| AFK73_RS25950 (AFK73_26050) | 27793..30102 | + | 2310 | WP_032436737 | type IV conjugative transfer system coupling protein TraD | virb4 |