T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1908..24572
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9308_RS31960 | 1..84 | - | 84 | Protein_0 | hypothetical protein | - |
| C9308_RS27715 (C9308_27745) | 382..669 | + | 288 | WP_000107537 | hypothetical protein | - |
| C9308_RS27720 (C9308_27750) | 790..1611 | + | 822 | WP_001234469 | DUF932 domain-containing protein | - |
| C9308_RS27725 (C9308_27755) | 1908..2555 | - | 648 | WP_000614282 | transglycosylase SLT domain-containing protein | virB1 |
| C9308_RS27730 (C9308_27760) | 2841..3224 | + | 384 | WP_001151564 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| C9308_RS27735 (C9308_27765) | 3418..4104 | + | 687 | WP_000332487 | PAS domain-containing protein | - |
| C9308_RS27740 (C9308_27770) | 4198..4425 | + | 228 | WP_001254388 | conjugal transfer relaxosome protein TraY | - |
| C9308_RS27745 (C9308_27775) | 4459..4821 | + | 363 | WP_001098998 | type IV conjugative transfer system pilin TraA | - |
| C9308_RS27750 (C9308_27780) | 4826..5137 | + | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| C9308_RS27755 (C9308_27785) | 5159..5725 | + | 567 | WP_000399804 | type IV conjugative transfer system protein TraE | traE |
| C9308_RS27760 (C9308_27790) | 5712..6440 | + | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| C9308_RS27765 (C9308_27795) | 6440..7867 | + | 1428 | WP_000146638 | F-type conjugal transfer pilus assembly protein TraB | traB |
| C9308_RS27770 (C9308_27800) | 7857..8441 | + | 585 | WP_000002795 | conjugal transfer pilus-stabilizing protein TraP | - |
| C9308_RS27775 (C9308_27805) | 8428..8748 | + | 321 | WP_001057302 | conjugal transfer protein TrbD | virb4 |
| C9308_RS27780 (C9308_27810) | 8741..8992 | + | 252 | WP_001038341 | conjugal transfer protein TrbG | - |
| C9308_RS27785 (C9308_27815) | 8989..9504 | + | 516 | WP_000809893 | type IV conjugative transfer system lipoprotein TraV | traV |
| C9308_RS27790 (C9308_27820) | 9639..9860 | + | 222 | WP_001278978 | conjugal transfer protein TraR | - |
| C9308_RS27795 (C9308_27825) | 10020..12647 | + | 2628 | WP_001064239 | type IV secretion system protein TraC | virb4 |
| C9308_RS27800 (C9308_27830) | 12644..13030 | + | 387 | WP_000214082 | type-F conjugative transfer system protein TrbI | - |
| C9308_RS27805 (C9308_27835) | 13027..13659 | + | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| C9308_RS27810 (C9308_27840) | 13656..14648 | + | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| C9308_RS27815 (C9308_27845) | 14678..14983 | + | 306 | WP_000224411 | hypothetical protein | - |
| C9308_RS27820 (C9308_27850) | 14992..15630 | + | 639 | WP_001080257 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| C9308_RS27825 (C9308_27855) | 15627..17435 | + | 1809 | WP_000821863 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| C9308_RS27830 (C9308_27860) | 17462..17719 | + | 258 | WP_000864320 | conjugal transfer protein TrbE | - |
| C9308_RS27835 (C9308_27865) | 17712..18455 | + | 744 | WP_001030371 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| C9308_RS27840 (C9308_27870) | 18471..18809 | + | 339 | WP_001287905 | conjugal transfer protein TrbA | - |
| C9308_RS27845 (C9308_27875) | 18936..19220 | + | 285 | WP_001448202 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C9308_RS27850 (C9308_27880) | 19207..19752 | + | 546 | WP_000059824 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| C9308_RS27855 (C9308_27885) | 19682..20023 | + | 342 | WP_001448115 | P-type conjugative transfer protein TrbJ | - |
| C9308_RS27860 (C9308_27890) | 20004..20396 | + | 393 | WP_000660703 | F-type conjugal transfer protein TrbF | - |
| C9308_RS27865 (C9308_27895) | 20383..21756 | + | 1374 | WP_001137364 | conjugal transfer pilus assembly protein TraH | traH |
| C9308_RS27870 (C9308_27900) | 21753..24572 | + | 2820 | WP_001007057 | conjugal transfer mating-pair stabilization protein TraG | traG |
| C9308_RS27875 (C9308_27905) | 24591..25088 | + | 498 | WP_000605861 | hypothetical protein | - |
| C9308_RS27880 (C9308_27910) | 25120..25851 | + | 732 | WP_000850422 | conjugal transfer complement resistance protein TraT | - |
| C9308_RS27885 (C9308_27915) | 26104..28275 | + | 2172 | WP_049077307 | type IV conjugative transfer system coupling protein TraD | - |