T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 6852..35005
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ND447_RS17575 (ND447_17565) | 1977..2984 | + | 1008 | WP_265317530 | toxin co-regulated pilus biosynthesis Q family protein | - |
| ND447_RS17580 (ND447_17570) | 2981..3406 | + | 426 | WP_234049643 | type IV pilus biogenesis protein PilM | - |
| ND447_RS17585 (ND447_17575) | 3417..5057 | + | 1641 | WP_267262820 | PilN family type IVB pilus formation outer membrane protein | - |
| ND447_RS17590 (ND447_17580) | 5062..6327 | + | 1266 | WP_120806788 | type 4b pilus protein PilO2 | - |
| ND447_RS17595 (ND447_17585) | 6314..6850 | + | 537 | WP_234049644 | type IV pilus biogenesis protein PilP | - |
| ND447_RS17600 (ND447_17590) | 6852..8354 | + | 1503 | WP_205582781 | GspE/PulE family protein | virB11 |
| ND447_RS17605 (ND447_17595) | 8415..9542 | + | 1128 | WP_234049646 | type II secretion system F family protein | - |
| ND447_RS17610 (ND447_17600) | 9564..10172 | + | 609 | WP_120806739 | type 4 pilus major pilin | - |
| ND447_RS17615 (ND447_17605) | 10182..10652 | + | 471 | WP_234049647 | lytic transglycosylase domain-containing protein | virB1 |
| ND447_RS17620 (ND447_17610) | 10649..11317 | + | 669 | WP_120806741 | prepilin peptidase | - |
| ND447_RS17625 (ND447_17615) | 11307..12686 | + | 1380 | WP_234049648 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| ND447_RS17630 (ND447_17620) | 12731..13186 | + | 456 | WP_120806742 | DotD/TraH family lipoprotein | - |
| ND447_RS17635 (ND447_17625) | 13183..13971 | + | 789 | WP_050074349 | type IV secretory system conjugative DNA transfer family protein | traI |
| ND447_RS17640 (ND447_17630) | 13991..15166 | + | 1176 | WP_145559185 | plasmid transfer ATPase TraJ | virB11 |
| ND447_RS17645 (ND447_17635) | 15166..15432 | + | 267 | WP_050074346 | IcmT/TraK family protein | traK |
| ND447_RS17650 (ND447_17640) | 15491..18715 | + | 3225 | WP_267262821 | LPD7 domain-containing protein | - |
| ND447_RS17655 (ND447_17645) | 18725..19210 | + | 486 | WP_234049650 | hypothetical protein | traL |
| ND447_RS17660 (ND447_17650) | 19295..19969 | + | 675 | WP_050074341 | DotI/IcmL/TraM family protein | traM |
| ND447_RS17665 (ND447_17655) | 19972..20982 | + | 1011 | WP_267262822 | DotH/IcmK family type IV secretion protein | traN |
| ND447_RS17670 (ND447_17660) | 20987..22198 | + | 1212 | WP_265317532 | conjugal transfer protein TraO | traO |
| ND447_RS17675 (ND447_17665) | 22198..22935 | + | 738 | WP_234049652 | hypothetical protein | traP |
| ND447_RS17680 (ND447_17670) | 22944..23474 | + | 531 | WP_050074337 | conjugal transfer protein TraQ | traQ |
| ND447_RS17685 (ND447_17675) | 23489..23893 | + | 405 | WP_108088340 | DUF6750 family protein | traR |
| ND447_RS17690 (ND447_17680) | 23984..24589 | + | 606 | WP_050074479 | hypothetical protein | traT |
| ND447_RS17695 (ND447_17685) | 24592..27666 | + | 3075 | WP_234049653 | type IV secretory system conjugative DNA transfer family protein | traU |
| ND447_RS17700 (ND447_17690) | 27857..29086 | + | 1230 | WP_120806751 | conjugal transfer protein TraW | traW |
| ND447_RS17705 (ND447_17695) | 29079..29684 | + | 606 | WP_050289008 | conjugal transfer protein TraX | - |
| ND447_RS17710 (ND447_17700) | 29813..31933 | + | 2121 | WP_234049654 | DotA/TraY family protein | traY |
| ND447_RS17715 (ND447_17705) | 31945..32517 | + | 573 | WP_088130798 | hypothetical protein | - |
| ND447_RS17720 (ND447_17710) | 32665..33981 | + | 1317 | WP_234049655 | conjugal transfer protein TrbA | trbA |
| ND447_RS17725 (ND447_17715) | 34004..35005 | + | 1002 | WP_265317513 | hypothetical protein | trbB |
| ND447_RS17730 (ND447_17720) | 35067..37244 | + | 2178 | WP_240442712 | F-type conjugative transfer protein TrbC | - |
| ND447_RS17735 (ND447_17725) | 37327..37632 | + | 306 | WP_267262812 | hypothetical protein | - |
| ND447_RS17740 (ND447_17730) | 37650..38186 | + | 537 | WP_234049659 | phospholipase D family protein | - |
| ND447_RS17745 (ND447_17735) | 38196..38513 | + | 318 | WP_050289016 | hypothetical protein | - |