T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 26774..50289
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HR38_RS32135 | 22813..22983 | - | 171 | WP_162933663 | hypothetical protein | - |
| HR38_RS28280 (HR38_28955) | 23176..23718 | + | 543 | WP_040118470 | antirestriction protein | - |
| HR38_RS28285 (HR38_28960) | 23741..24163 | - | 423 | WP_051800693 | transglycosylase SLT domain-containing protein | - |
| HR38_RS28290 (HR38_28965) | 24668..25060 | + | 393 | WP_020804860 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HR38_RS28295 (HR38_28970) | 25298..25990 | + | 693 | WP_032426082 | conjugal transfer protein TrbJ | - |
| HR38_RS30910 | 26165..26329 | + | 165 | WP_032426810 | TraY domain-containing protein | - |
| HR38_RS28300 (HR38_28975) | 26392..26760 | + | 369 | WP_040118418 | type IV conjugative transfer system pilin TraA | - |
| HR38_RS28305 (HR38_28980) | 26774..27079 | + | 306 | WP_020323523 | type IV conjugative transfer system protein TraL | traL |
| HR38_RS28310 (HR38_28985) | 27099..27665 | + | 567 | WP_040118472 | type IV conjugative transfer system protein TraE | traE |
| HR38_RS28315 (HR38_28990) | 27652..28392 | + | 741 | WP_040118473 | type-F conjugative transfer system secretin TraK | traK |
| HR38_RS28320 (HR38_28995) | 28392..29807 | + | 1416 | WP_040118474 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HR38_RS31935 | 29800..30396 | + | 597 | WP_117146400 | conjugal transfer protein TraP | - |
| HR38_RS28330 (HR38_29005) | 30636..31217 | + | 582 | WP_040118475 | type IV conjugative transfer system lipoprotein TraV | traV |
| HR38_RS28335 (HR38_29010) | 31364..31567 | + | 204 | WP_020315141 | hypothetical protein | - |
| HR38_RS28340 (HR38_29015) | 31808..32221 | + | 414 | WP_040118476 | hypothetical protein | - |
| HR38_RS28345 (HR38_29020) | 32250..32549 | + | 300 | WP_040118477 | hypothetical protein | - |
| HR38_RS28350 (HR38_29025) | 32566..32790 | + | 225 | WP_040118478 | hypothetical protein | - |
| HR38_RS28355 (HR38_29030) | 32787..33191 | + | 405 | WP_040118479 | hypothetical protein | - |
| HR38_RS28360 (HR38_29035) | 33324..35963 | + | 2640 | WP_040118480 | type IV secretion system protein TraC | virb4 |
| HR38_RS28365 (HR38_29040) | 35996..36397 | + | 402 | WP_051800694 | type-F conjugative transfer system protein TrbI | - |
| HR38_RS28370 (HR38_29045) | 36394..37020 | + | 627 | WP_040118481 | type-F conjugative transfer system protein TraW | traW |
| HR38_RS28375 (HR38_29050) | 37040..38023 | + | 984 | WP_074423225 | conjugal transfer pilus assembly protein TraU | traU |
| HR38_RS28380 (HR38_29055) | 38036..38653 | + | 618 | WP_040118483 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HR38_RS28385 (HR38_29060) | 38650..40530 | + | 1881 | WP_040118484 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HR38_RS28390 (HR38_29065) | 40568..40849 | + | 282 | WP_040118485 | hypothetical protein | - |
| HR38_RS28395 (HR38_29070) | 40839..41066 | + | 228 | WP_040118486 | conjugal transfer protein TrbE | - |
| HR38_RS28400 (HR38_29075) | 41077..41403 | + | 327 | WP_040118487 | hypothetical protein | - |
| HR38_RS28405 (HR38_29080) | 41422..42174 | + | 753 | WP_040118488 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HR38_RS28410 (HR38_29085) | 42185..42424 | + | 240 | WP_040118489 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HR38_RS28415 (HR38_29090) | 42396..42971 | + | 576 | WP_040118490 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HR38_RS28420 (HR38_29095) | 42958..44328 | + | 1371 | WP_040118491 | conjugal transfer pilus assembly protein TraH | traH |
| HR38_RS28425 (HR38_29100) | 44328..47201 | + | 2874 | WP_040118492 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HR38_RS28430 (HR38_29105) | 47212..47745 | + | 534 | WP_040118493 | hypothetical protein | - |
| HR38_RS28435 (HR38_29110) | 47989..50289 | + | 2301 | WP_040118494 | type IV conjugative transfer system coupling protein TraD | virb4 |