T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 45371..74442
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HR38_RS27255 (HR38_27890) | 45371..47701 | - | 2331 | WP_040118437 | type IV conjugative transfer system coupling protein TraD | virb4 |
| HR38_RS27260 (HR38_27895) | 47895..48626 | - | 732 | WP_032716670 | conjugal transfer complement resistance protein TraT | - |
| HR38_RS27265 (HR38_27900) | 48821..49435 | - | 615 | WP_032732092 | hypothetical protein | - |
| HR38_RS27270 (HR38_27905) | 49461..52283 | - | 2823 | WP_040118409 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HR38_RS27275 (HR38_27910) | 52283..53653 | - | 1371 | WP_032700807 | conjugal transfer pilus assembly protein TraH | traH |
| HR38_RS27280 (HR38_27915) | 53640..54068 | - | 429 | WP_032700808 | conjugal transfer protein TrbF | - |
| HR38_RS27285 (HR38_27920) | 54061..54627 | - | 567 | WP_032732090 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HR38_RS27290 (HR38_27925) | 54602..54838 | - | 237 | WP_032700810 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HR38_RS27295 (HR38_27930) | 54849..55601 | - | 753 | WP_040118410 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HR38_RS27300 (HR38_27935) | 55624..55950 | - | 327 | WP_032700812 | hypothetical protein | - |
| HR38_RS27305 (HR38_27940) | 56240..57208 | - | 969 | WP_077255412 | IS5 family transposase | - |
| HR38_RS27310 (HR38_27945) | 57288..59243 | - | 1956 | WP_040118411 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HR38_RS27315 (HR38_27950) | 59243..59872 | - | 630 | WP_032700817 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HR38_RS27320 (HR38_27955) | 59885..60844 | - | 960 | WP_032716690 | conjugal transfer pilus assembly protein TraU | traU |
| HR38_RS27325 (HR38_27960) | 60885..61514 | - | 630 | WP_032716660 | type-F conjugative transfer system protein TraW | traW |
| HR38_RS27330 (HR38_27965) | 61511..61903 | - | 393 | WP_032716659 | type-F conjugative transfer system protein TrbI | - |
| HR38_RS27335 (HR38_27970) | 61903..64542 | - | 2640 | WP_032716658 | type IV secretion system protein TraC | virb4 |
| HR38_RS27340 (HR38_27975) | 64622..65011 | - | 390 | WP_040118412 | hypothetical protein | - |
| HR38_RS27350 (HR38_27985) | 65388..65792 | - | 405 | WP_040118414 | hypothetical protein | - |
| HR38_RS27355 (HR38_27990) | 65789..66010 | - | 222 | WP_032732073 | hypothetical protein | - |
| HR38_RS32380 | 66492..66971 | - | 480 | WP_223306708 | hypothetical protein | - |
| HR38_RS30720 | 67078..67647 | - | 570 | WP_071889124 | type IV conjugative transfer system lipoprotein TraV | traV |
| HR38_RS27370 (HR38_28005) | 67666..67872 | - | 207 | WP_032700826 | hypothetical protein | - |
| HR38_RS27375 | 67853..68449 | - | 597 | WP_119834738 | conjugal transfer protein TraP | - |
| HR38_RS27380 (HR38_28015) | 68442..69860 | - | 1419 | WP_040118415 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HR38_RS27385 (HR38_28020) | 69860..70594 | - | 735 | WP_040118416 | type-F conjugative transfer system secretin TraK | traK |
| HR38_RS27390 (HR38_28025) | 70581..71147 | - | 567 | WP_040118417 | type IV conjugative transfer system protein TraE | traE |
| HR38_RS27395 (HR38_28030) | 71167..71472 | - | 306 | WP_020323523 | type IV conjugative transfer system protein TraL | traL |
| HR38_RS27400 (HR38_28035) | 71486..71854 | - | 369 | WP_040118418 | type IV conjugative transfer system pilin TraA | - |
| HR38_RS30725 | 71917..72081 | - | 165 | WP_032426810 | TraY domain-containing protein | - |
| HR38_RS30730 | 72259..72948 | - | 690 | WP_071889125 | hypothetical protein | - |
| HR38_RS27405 (HR38_28040) | 73149..73538 | - | 390 | WP_032700831 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HR38_RS27410 (HR38_28045) | 73963..74442 | + | 480 | WP_032716648 | transglycosylase SLT domain-containing protein | virB1 |
| HR38_RS27415 (HR38_28050) | 74480..75010 | - | 531 | WP_032716647 | antirestriction protein | - |
| HR38_RS27420 | 75695..75841 | - | 147 | WP_032700834 | hypothetical protein | - |
| HR38_RS27425 (HR38_28060) | 75935..76282 | - | 348 | WP_032700835 | hypothetical protein | - |
| HR38_RS27430 (HR38_28065) | 76308..76466 | - | 159 | WP_162180130 | hypothetical protein | - |
| HR38_RS27435 (HR38_28070) | 76523..76798 | - | 276 | WP_032700867 | hypothetical protein | - |
| HR38_RS27440 (HR38_28075) | 77617..77898 | - | 282 | WP_004118961 | helix-turn-helix transcriptional regulator | - |
| HR38_RS27445 (HR38_28080) | 77879..78208 | - | 330 | WP_004118963 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HR38_RS32385 | 78528..78615 | - | 88 | Protein_79 | theronine dehydrogenase | - |
| HR38_RS27450 (HR38_28085) | 78612..79340 | - | 729 | WP_004118966 | plasmid SOS inhibition protein A | - |