T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 14328..42746
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LTX92_RS04230 (LTX92_04230) | 14328..16637 | - | 2310 | WP_004152630 | type IV conjugative transfer system coupling protein TraD | virb4 |
| LTX92_RS04235 (LTX92_04235) | 16997..17728 | - | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| LTX92_RS04240 (LTX92_04240) | 17918..18445 | - | 528 | WP_004153030 | hypothetical protein | - |
| LTX92_RS04245 (LTX92_04245) | 18451..21300 | - | 2850 | WP_004178054 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LTX92_RS04250 (LTX92_04250) | 21300..22670 | - | 1371 | WP_004178055 | conjugal transfer pilus assembly protein TraH | traH |
| LTX92_RS04255 (LTX92_04255) | 22657..23085 | - | 429 | WP_004152689 | hypothetical protein | - |
| LTX92_RS04260 (LTX92_04260) | 23078..23650 | - | 573 | WP_004152688 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LTX92_RS04265 (LTX92_04265) | 23622..23861 | - | 240 | WP_004152687 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LTX92_RS04270 (LTX92_04270) | 23872..24624 | - | 753 | WP_004152686 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LTX92_RS04275 (LTX92_04275) | 24645..24971 | - | 327 | WP_004152685 | hypothetical protein | - |
| LTX92_RS28485 | 25017..25202 | - | 186 | WP_004152684 | hypothetical protein | - |
| LTX92_RS04280 (LTX92_04280) | 25199..25435 | - | 237 | WP_004152683 | conjugal transfer protein TrbE | - |
| LTX92_RS04285 (LTX92_04285) | 25467..27422 | - | 1956 | WP_004153093 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LTX92_RS04290 (LTX92_04290) | 27470..28108 | - | 639 | WP_004152682 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LTX92_RS04295 (LTX92_04295) | 28121..29080 | - | 960 | WP_015065634 | conjugal transfer pilus assembly protein TraU | traU |
| LTX92_RS04300 (LTX92_04300) | 29124..29750 | - | 627 | WP_004152590 | type-F conjugative transfer system protein TraW | traW |
| LTX92_RS04305 (LTX92_04305) | 29750..30139 | - | 390 | WP_004152591 | type-F conjugative transfer system protein TrbI | - |
| LTX92_RS04310 (LTX92_04310) | 30139..32778 | - | 2640 | WP_004152592 | type IV secretion system protein TraC | virb4 |
| LTX92_RS04315 (LTX92_04315) | 32850..33248 | - | 399 | WP_004153071 | hypothetical protein | - |
| LTX92_RS04320 (LTX92_04320) | 33544..33948 | - | 405 | WP_004152594 | hypothetical protein | - |
| LTX92_RS04325 (LTX92_04325) | 34015..34332 | - | 318 | WP_004152595 | hypothetical protein | - |
| LTX92_RS04330 (LTX92_04330) | 34333..34551 | - | 219 | WP_004171484 | hypothetical protein | - |
| LTX92_RS04335 (LTX92_04335) | 34575..34865 | - | 291 | WP_004152596 | hypothetical protein | - |
| LTX92_RS04340 (LTX92_04340) | 34870..35280 | - | 411 | WP_004152597 | lipase chaperone | - |
| LTX92_RS04345 (LTX92_04345) | 35412..35981 | - | 570 | WP_004152598 | type IV conjugative transfer system lipoprotein TraV | traV |
| LTX92_RS04350 (LTX92_04350) | 36004..36600 | - | 597 | WP_004152599 | conjugal transfer pilus-stabilizing protein TraP | - |
| LTX92_RS04355 (LTX92_04355) | 36593..38017 | - | 1425 | WP_004152600 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LTX92_RS04360 (LTX92_04360) | 38017..38757 | - | 741 | WP_004152601 | type-F conjugative transfer system secretin TraK | traK |
| LTX92_RS04365 (LTX92_04365) | 38744..39310 | - | 567 | WP_004152602 | type IV conjugative transfer system protein TraE | traE |
| LTX92_RS04370 (LTX92_04370) | 39330..39635 | - | 306 | WP_004178059 | type IV conjugative transfer system protein TraL | traL |
| LTX92_RS04375 (LTX92_04375) | 39649..40017 | - | 369 | WP_004178060 | type IV conjugative transfer system pilin TraA | - |
| LTX92_RS04380 (LTX92_04380) | 40071..40442 | - | 372 | WP_004208838 | TraY domain-containing protein | - |
| LTX92_RS04385 (LTX92_04385) | 40526..41221 | - | 696 | WP_004178061 | transcriptional regulator TraJ family protein | - |
| LTX92_RS04390 (LTX92_04390) | 41435..41827 | - | 393 | WP_004178062 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LTX92_RS04395 (LTX92_04395) | 42261..42746 | + | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| LTX92_RS04400 (LTX92_04400) | 42779..43108 | - | 330 | WP_011977736 | DUF5983 family protein | - |
| LTX92_RS04405 (LTX92_04405) | 43141..43962 | - | 822 | WP_004178064 | DUF932 domain-containing protein | - |
| LTX92_RS04410 (LTX92_04410) | 44796..45209 | - | 414 | WP_004152722 | helix-turn-helix domain-containing protein | - |
| LTX92_RS04415 (LTX92_04415) | 45210..45488 | - | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| LTX92_RS04420 (LTX92_04420) | 45478..45798 | - | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LTX92_RS04425 (LTX92_04425) | 45879..46103 | - | 225 | WP_004152719 | hypothetical protein | - |
| LTX92_RS04430 (LTX92_04430) | 46114..46326 | - | 213 | WP_004152718 | hypothetical protein | - |
| LTX92_RS04435 (LTX92_04435) | 46387..46743 | - | 357 | WP_004152717 | hypothetical protein | - |
| LTX92_RS04440 (LTX92_04440) | 47379..47729 | - | 351 | WP_004152758 | hypothetical protein | - |