T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1286505..1295920
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U8C36_RS25920 (U8C36_25930) | 1281760..1281920 | - | 161 | Protein_1263 | integrase | - |
| U8C36_RS25925 (U8C36_25935) | 1282016..1282210 | - | 195 | WP_024312638 | hypothetical protein | - |
| U8C36_RS25930 (U8C36_25940) | 1282418..1282618 | - | 201 | WP_102764985 | IS66 family insertion sequence element accessory protein TnpB | - |
| U8C36_RS25935 (U8C36_25945) | 1282664..1283342 | - | 679 | Protein_1266 | IS110 family transposase | - |
| U8C36_RS25940 (U8C36_25950) | 1283558..1285042 | + | 1485 | WP_153445718 | IS21 family transposase | - |
| U8C36_RS25945 (U8C36_25955) | 1285039..1285935 | + | 897 | WP_101778737 | IS21-like element helper ATPase IstB | - |
| U8C36_RS25950 (U8C36_25960) | 1285987..1286205 | - | 219 | Protein_1269 | IS110 family transposase | - |
| U8C36_RS25955 (U8C36_25965) | 1286505..1287545 | - | 1041 | WP_011970871 | P-type DNA transfer ATPase VirB11 | virB11 |
| U8C36_RS25960 (U8C36_25970) | 1287585..1288703 | - | 1119 | WP_028054757 | type IV secretion system protein VirB10 | virB10 |
| U8C36_RS25965 (U8C36_25975) | 1288700..1289581 | - | 882 | WP_322887265 | P-type conjugative transfer protein VirB9 | virB9 |
| U8C36_RS25970 (U8C36_25980) | 1289578..1290290 | - | 713 | Protein_1273 | type IV secretion system protein VirB8 | - |
| U8C36_RS25975 (U8C36_25985) | 1290277..1290444 | - | 168 | WP_080665920 | type IV secretion system lipoprotein VirB7 | - |
| U8C36_RS25980 (U8C36_25990) | 1290477..1291365 | - | 889 | Protein_1275 | type IV secretion system protein | - |
| U8C36_RS25985 (U8C36_25995) | 1291448..1292131 | - | 684 | WP_018009784 | pilin minor subunit VirB5 | traI |
| U8C36_RS25990 (U8C36_26000) | 1292145..1294514 | - | 2370 | WP_028054760 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| U8C36_RS25995 (U8C36_26005) | 1294514..1294840 | - | 327 | WP_003537077 | type IV secretion system protein VirB3 | virB3 |
| U8C36_RS26000 (U8C36_26010) | 1294837..1295199 | - | 363 | WP_014528518 | pilin major subunit VirB2 | virB2 |
| U8C36_RS26005 (U8C36_26015) | 1295213..1295920 | - | 708 | WP_028054762 | type IV secretion system lytic transglycosylase VirB1 | virB1 |
| U8C36_RS26010 (U8C36_26020) | 1296552..1296731 | + | 180 | Protein_1281 | transposase | - |
| U8C36_RS26015 (U8C36_26025) | 1296972..1297154 | - | 183 | Protein_1282 | Lrp/AsnC ligand binding domain-containing protein | - |
| U8C36_RS26020 (U8C36_26030) | 1297189..1298012 | + | 824 | Protein_1283 | type IV secretory system conjugative DNA transfer family protein | - |
| U8C36_RS26025 (U8C36_26035) | 1298409..1299497 | + | 1089 | WP_153417059 | IS630 family transposase | - |
| U8C36_RS26030 (U8C36_26040) | 1299536..1300048 | - | 513 | Protein_1285 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| U8C36_RS26035 (U8C36_26045) | 1300196..1300714 | + | 519 | WP_028054765 | hypothetical protein | - |