T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 995218..1004632
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U8C35_RS25190 (U8C35_25195) | 990370..990543 | - | 174 | WP_162305702 | hypothetical protein | - |
| U8C35_RS25195 (U8C35_25200) | 991317..991477 | - | 161 | Protein_1004 | integrase | - |
| U8C35_RS25200 (U8C35_25205) | 991975..992175 | - | 201 | WP_102764985 | IS66 family insertion sequence element accessory protein TnpB | - |
| U8C35_RS25205 (U8C35_25210) | 992221..992899 | - | 679 | Protein_1006 | IS110 family transposase | - |
| U8C35_RS25210 (U8C35_25215) | 993016..994530 | + | 1515 | WP_018209585 | ISNCY family transposase | - |
| U8C35_RS25215 (U8C35_25220) | 994700..994918 | - | 219 | Protein_1008 | IS110 family transposase | - |
| U8C35_RS25220 (U8C35_25225) | 995218..996258 | - | 1041 | WP_011970871 | P-type DNA transfer ATPase VirB11 | virB11 |
| U8C35_RS25225 (U8C35_25230) | 996298..997416 | - | 1119 | WP_028054757 | type IV secretion system protein VirB10 | virB10 |
| U8C35_RS25230 (U8C35_25235) | 997413..998294 | - | 882 | WP_011970873 | P-type conjugative transfer protein VirB9 | virB9 |
| U8C35_RS25235 (U8C35_25240) | 998291..999003 | - | 713 | Protein_1012 | type IV secretion system protein VirB8 | - |
| U8C35_RS25240 (U8C35_25245) | 998990..999157 | - | 168 | WP_080665920 | type IV secretion system lipoprotein VirB7 | - |
| U8C35_RS25245 (U8C35_25250) | 999190..1000077 | - | 888 | WP_088896200 | type IV secretion system protein | virB6 |
| U8C35_RS25250 (U8C35_25255) | 1000160..1000843 | - | 684 | WP_018009784 | pilin minor subunit VirB5 | traI |
| U8C35_RS25255 (U8C35_25260) | 1000857..1003226 | - | 2370 | WP_028054760 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| U8C35_RS25260 (U8C35_25265) | 1003226..1003552 | - | 327 | WP_003537077 | type IV secretion system protein VirB3 | virB3 |
| U8C35_RS25265 (U8C35_25270) | 1003549..1003911 | - | 363 | WP_014528518 | pilin major subunit VirB2 | virB2 |
| U8C35_RS25270 (U8C35_25275) | 1003925..1004632 | - | 708 | WP_028054762 | type IV secretion system lytic transglycosylase VirB1 | virB1 |
| U8C35_RS25275 (U8C35_25280) | 1005264..1005443 | + | 180 | Protein_1020 | transposase | - |
| U8C35_RS25280 (U8C35_25285) | 1005684..1005866 | - | 183 | Protein_1021 | Lrp/AsnC ligand binding domain-containing protein | - |
| U8C35_RS25285 (U8C35_25290) | 1005901..1006724 | + | 824 | Protein_1022 | type IV secretory system conjugative DNA transfer family protein | - |
| U8C35_RS25290 (U8C35_25295) | 1007121..1008209 | + | 1089 | WP_153417059 | IS630 family transposase | - |
| U8C35_RS25295 (U8C35_25300) | 1008248..1008730 | - | 483 | WP_322884370 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| U8C35_RS25300 (U8C35_25305) | 1008908..1009426 | + | 519 | WP_028054765 | hypothetical protein | - |