T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 111802..123023
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HS649_RS00500 (pRi2659_p079) | 110071..110637 | + | 567 | WP_012475991 | conjugative transfer signal peptidase TraF | - |
| HS649_RS00505 (pRi2659_p080) | 110627..111790 | + | 1164 | WP_012475992 | conjugal transfer protein TraB | - |
| HS649_RS00510 (pRi2659_p081) | 111802..112416 | + | 615 | WP_012475993 | TraH family protein | virB1 |
| HS649_RS00515 (pRi2659_p082) | 112672..112878 | - | 207 | WP_077768126 | helix-turn-helix transcriptional regulator | - |
| HS649_RS00520 (pRi2659_p083) | 113096..113419 | + | 324 | WP_012475995 | transcriptional repressor TraM | - |
| HS649_RS00525 (pRi2659_p084) | 113424..114128 | - | 705 | WP_172684625 | autoinducer binding domain-containing protein | - |
| HS649_RS00530 (pRi2659_p085) | 114474..115766 | - | 1293 | WP_012475997 | IncP-type conjugal transfer protein TrbI | virB10 |
| HS649_RS00535 (pRi2659_p086) | 115778..116218 | - | 441 | WP_012475998 | conjugal transfer protein TrbH | - |
| HS649_RS00540 (pRi2659_p087) | 116222..117034 | - | 813 | WP_012475999 | P-type conjugative transfer protein TrbG | virB9 |
| HS649_RS00545 (pRi2659_p088) | 117051..117713 | - | 663 | WP_012476000 | conjugal transfer protein TrbF | virB8 |
| HS649_RS00550 (pRi2659_p089) | 117734..118915 | - | 1182 | WP_012476001 | P-type conjugative transfer protein TrbL | virB6 |
| HS649_RS00555 (pRi2659_p090) | 118909..119109 | - | 201 | WP_012476002 | entry exclusion protein TrbK | - |
| HS649_RS00560 (pRi2659_p091) | 119106..119909 | - | 804 | WP_077768124 | P-type conjugative transfer protein TrbJ | virB5 |
| HS649_RS00565 (pRi2659_p092) | 119881..122337 | - | 2457 | WP_012476004 | conjugal transfer protein TrbE | virb4 |
| HS649_RS00570 (pRi2659_p093) | 122348..122647 | - | 300 | WP_012476005 | conjugal transfer protein TrbD | virB3 |
| HS649_RS00575 (pRi2659_p094) | 122640..123023 | - | 384 | WP_012476006 | TrbC/VirB2 family protein | virB2 |
| HS649_RS00580 | 123013..123989 | - | 977 | Protein_116 | P-type conjugative transfer ATPase TrbB | - |
| HS649_RS00585 (pRi2659_p096) | 123999..124622 | - | 624 | WP_012476008 | acyl-homoserine-lactone synthase | - |
| HS649_RS00590 (pRi2659_p097) | 125005..126213 | + | 1209 | WP_234888145 | plasmid partitioning protein RepA | - |
| HS649_RS00595 (pRi2659_p098) | 126307..127314 | + | 1008 | WP_012476010 | plasmid partitioning protein RepB | - |