Detailed information of relaxase

Relaxase

• ID: 568
• GenBank: YP_006964311
• Name: TraD_p14-120
• UniProt ID: I3W357
• Family: MOB_F
• PDB ID: _
• Length: 1767 a.a.
• Note: putative relaxase

Protein sequence

• Length: 1767 a.a.
• Molecular weight: 193737.36 Da
• Isoelectric Point: 5.0822

>YP_006964311.1 IncF plasmid conjugative transfer protein TraD (plasmid) [Salmonella sp. 14]
MLSISSIKGDAGYYSHEDNYYASGSLDSRWMGEGAEKLGLKGEVASADMDAVRQGRLPDGSDLSRMVDGV
NKHRSGYDLTFSAPKSVSVMALVGEDRRFIEAHNRAVAVVMQEVEQLVSARITQEGKTETVLTGSMVAAL
YNHDTSRDLDPQVHTHALVFNATFADDKWRSLASDTRMKTGFSENLYATKIALGNLYRAALREDIESMGF
ETVAAGKHGLWELKDVPVDIFSSRSQSIRKAAGPDASAKSRDIAALDTRQAKAWADPELLKADWRRRLTD
EKFDIDNYISQAQTRAEPPGPVVGGTEGIRSTGQPASASSAQISELDVQKAVSDTISALSDKKVQFSWSE
MLAGTVSRLPSAPGLFVQARAAIEASIEGQRLIPLDREKGIFTSDIHLLNELSVHQLARTAIQEQTVLVF
PERAQERDIPAGDAVSVLSQDKSPVAILSGRGGAQTLRERTEDVAMMARSQGREVMVIAADGRSGQFLSE
SPHLAGHVMLRSQMNADTLLPVQGTVIVDRAERLSLKETVLLQEKALSAGAQLIFMDTENRQGTGNALSV
LKEADIPQYRFYSTQLPEVRLVSEADKRSRYSQLAQDYVRLSAEGRDVVAQVTGAREQQQLTEVIRDTRR
EAGELGREQVTLRVLEPVWLDSKTRHQRDNYRPGMVMEQWDAEKKTMTRHTIDRVAEATNSLVLLGEDGT
RLTMKVTQLDGSWSLYRSRTLEVSEGDRVRALGRELKGAIKAKEQFTVAGLENGAVRLRSGDRELRLPTE
RAVKLTHDYVEGTGAGTSASRTVLAAVGPRGLNKQALNALAQSGSDIRIYTPREGRQAARKVESVSAVRL
ASDQVRQLTGEANLDTAIQASRERLMSDAEQAVNLAIPRAQQGQVYLSELTLLAEAVKSGQPLADVRTEI
ARQVDSGALIKLDSVAGAGNRVLVPRVAYEMEKTIIRHIAEGKDAVQPLMALTPASVLSGLTAGQREATR
TVLENTDRFMAIQGYAGVGKTTQFRAVMGALNTLSESVRPQVIGLGPTHRAVHEMREAGVEARTLASFLS
ETRQAIQAGETPDFRNVLFLTDESSMVGNRDMAELYQLVAAGGGRMVSSGDTAQLQAVSTGQPFRLVQQR
SAIDTVVMQEIVRQTPALRPAIESIIAGQVEISLRQVDDVTPQQVPRQPGAWVPDNSVMEIRAPKKEQDQ
VQDTPVAGEQTLTPEQLALVRTDIIEAIRDDWMGRTSEAQQQTLVVAELNADRHAINAAIHAARHEKGDT
GAEERTFTVLEPLRVPDNALRAAETFAEYTGAVAMMNERYWTVAEVDTQDAVVTLRNADGESVLISPQQN
TAQDISLFTPRELTISQGDRVRFTRSDTDRGYVANSLWEVAGFTDGGAIRFRQGEQEKIVDPQAMTEDRH
IDLAYALTVYGVQGASERFAIALTGTEGGRKRMASLESTYVTLSRAKEHVQVYTDNLEDWQQQVRQSDGG
KTAHDLLHEKSDRESDTGNRLLATALRLDKTALGRRVLAENGLEGETMARFIAAGKKYPSPYVALPAWTR
HGKAAGALLTEIRIEDDGMRVMLSDESRLRGGDDAQFAGLQASRNGQTLIADDAQTALRLAQENPESGVV
IRLHGEERLLNAARLTGGRITEPDEVERTVRSVAEAESAAKTEDPITLPPDEQQKLAEAQEKAARELAEQ
ARQELLPEMPGEESSRPEPLLSADEERRLRDGTARGERELDEAIQEAVADGRGIRQQVREQMLRTEREWV
VNVPEKDIELEKTLGGD

Protein domains

Predicted by InterproScan

• single-stranded DNA binding TraI N-terminal subdomain (ssDNA_TraI_N) (586-638)

• DNA helicase TraI (TraI_C) (1441-1558)

• DNA relaxase TraI 2B/2B-like domain (TraI_2B) (644-723)

• TrwC relaxase (TrwC) (12-279)

• AAA domain (AAA_30) (971-1155)

Protein structure

No available structure.