Detailed information of relaxase

Relaxase

• ID: 4601
• GenBank: WP_020919038
• Name: traA_REMIM1_RS24110_pRetNIM1c
• UniProt ID: S5S3Y8
• Family: MOB_Q
• PDB ID: _
• Length: 1103 a.a.
• Note: Predicted by oriTfinder 2.0

Protein sequence

• Length: 1103 a.a.
• Molecular weight: 122358.82 Da
• Isoelectric Point: 9.8995

>WP_020919038.1 Ti-type conjugative transfer relaxase TraA [Rhizobium etli]
MAVPHFSVSVVARGSGRSAVLSAAYRHCAKMEYEREARTIDYTRKQGLLHEEFVIPADAPEWLRSMIADR
SVAGASEAFWNKVEDFEKRSDAQLAKDVTIALPLELTPEQNITLLRDFVAQHITAKGMVVDWVYHDAPGN
PHVHLMTTLRPLTADGFGAKKVPVTGPDGNPIRNDAGKIVYELWAGSIDDFNVFRDGWFACQNRHLALAG
LDIRVDGRSFEKQGIDLEPTIHLGVGTKAIERKSDGASEPVELERLELQEARRSENVRRIDRNPELVLAL
IMREKSVFDERDVAKILHRYVDDAALFQSLMVRILLCPETFRIERERIDLANGIRVPAKYTTRDMIRLEA
EMANRAVWLSQRSSHGVRDVVLAATFARHKRLSDEQKTAIEHVAGPERIAAVIGRAGAGKTTMMKAAREA
WEAAGYHVVGGALAGKAAEGLEQEAGIVSRTLASWELRWNQGRDQLDSKTVFVLDEAGMVSSRQMALFVE
AVTKAGAKLVLVGDPEQLQPIEAGAAFRAIADRIGYAELETIYRQRQQWMRDASLDLARGKVGKAVDAYR
ANGKVIGLDLKADAVDNLIAAWDRDYDPAKTSLILAHLRRDVRMLNQMARIKLIERGILGQGTVFKTADG
ERNFAVGDQIVFLKNEGSLGVKNGMLAKVMGVGAGRIIARIGDGENARQVLVEQRFYQHLDHGYATTIHK
SQGATVDQVKVLASLSLDRHLTYVAMTRHREDLAVYYGRRSFAKNGGLVAILSRRNAKETTLDYEKSAFY
RQALRFAEARGLNLVNVARTLVRDRLEWVVSQKQKLAKLGVRLAAIAGKLGLVRGAAQSPTQNRTKEAKP
MVSGITTFAKSVEQAIEDKVAADPGLKKQWEEVSTRFHLVYAQPESAFKAVNVDAMLKDETAQKSTLAKI
GSEPERFGTLKGKTGILASRSDREEREKAQTNAPALARNLERYLRQRAEAERKFEAEERAVRLKVSIDIP
ALSANAKQTLERVRDAIDRNDLPAGLEYALADKMVKAELEGFAKAVAERFGERTFLSLAAKEPNGQTFNT
VTSGMTAGQKAEVQSAWNMMRTVQQLAAHERTTEALKQAETMRQTKSQGLSLK

Protein domains

Predicted by InterproScan

• MobA/MobL family (MobA_MobL) (17-243)

• AAA domain (AAA_30) (382-566)

• Viral (Superfamily 1) RNA helicase (Viral_helicase1) (689-735)

• BID domain of Bartonella effector protein (Bep) (Bep_C_terminal) (859-955)

Protein structure

• AlphaFold DB: S5S3Y8