Detailed information of relaxase

Relaxase

• ID: 46
• GenBank: NP_053349
• Name: TraA_pTi-SAKURA
• UniProt ID: Q9R6F0
• Family: MOB_Q
• PDB ID: _
• Length: 1194 a.a.
• Note: Dtr system oriT relaxase; Provisional

Protein sequence

• Length: 1194 a.a.
• Molecular weight: 133752.08 Da
• Isoelectric Point: 9.4620

>NP_053349.1 hypothetical protein pTi-SAKURA_p111 (plasmid) [Agrobacterium tumefaciens]
MAIAHFSASIVSRGDGRSAVLSAAYRHCAKMDYEREARTIDYTRKVGLLHEEFLLPDHAPKWVRMLIADR
SVAGASEAFWNRVEAFEKRIDAQLAKDLTVALPLELTAEQNIALVRDFVEKHILSRGMVADWVYHDNPGN
PHIHLMTTLRPLTEDGFGAKKVAVIGEDGEPLRTKAGKIVYELWAGGTDDFNAFRYAWFERMNHHLALNG
INLRVDGRSYEKQGIDLVPTIHLGVGAKAIERKAEGEGRKAELERLELNEERREENARRIRENPKLVLDL
ITREKSVFDERDVAKILHRYIDDAGMFRNMMARIMQSGQVLRLERERISLATGKREPSKFTTHELIRLEA
TMARSAMWLDRRSSHGVGKVLLDATFARHDRLSQEQRTALAHIAGANRIAAVVGRAGAGKTTMMKAARET
WEAAGYRVVGAALAGKAAEGLEKEAGIIARTLSSWELRWQQERDRLDDRTVMVLDEAGMVSSRQMAMLVQ
AATEAGAKLVLVGDPDQLQPIEAGAAFRAITDRIGYAELGTIYRQREAWMRRASVDLAHRQVGSALAAYD
RANLIHSHWSKDEAIASLIEDWNRDYDPARSSLILAHRRLDVRALNELARERLVGRGFVGEGFAFRTEEG
ERRFDAGDRIVFLKNEGSLGVKNGMLAKVVEAAPGRFVAEIGEGEDGRQVTVDQHLYANVDHGYATTIHK
SQGATVDDVRVLASGTMDRHLTYVALTRHRDAARLYVGMNEFTNRGGVLVDHGEAPYENKPENHDSYFVT
LETGEGKQNTIWGVDLRRAMAEAAPQIGDRIGLDHKGSEMVRLPDGKKVKRHTWKVVDIRELALSRMTER
MSRDAAKETTLDYENASFYRAALRFADTHGLRVMNVARTMMRDRLDWTVRQKQRLARLGSRLLAIGGKLG
LVSSTHQQQSLSSNMKEVRPMVAGITIHPKSLDQAVEDKLAADPGLKKQWEEVSSRFHLIYAQPEAAFRA
VDVDAALKDPATAKSTLAKIANEPESFGALKGKTGLFASRVEKEDRDIAHVNAPALSRDLERYLQMRTNA
MQRLEAEERAIRHRVSIDIPALSPSARTVLERVRDAIDRNDLPAALGYAVSDKEAKLEIDGFNKAVSERF
GERSLLTNAAREPSGRLFEQLAKGLQPQEKEHLAEAWPVMRTAQQLAAHERTAATLKQVEDLRLSQRQTP
VIKQ

Protein domains

Predicted by InterproScan

• MobA/MobL family (MobA_MobL) (17-243)

• Viral (Superfamily 1) RNA helicase (Viral_helicase1) (686-735)

• BID domain of Bartonella effector protein (Bep) (Bep_C_terminal) (949-1045)

• AAA domain (AAA_30) (382-568)

Protein structure

• AlphaFold DB: Q9R6F0

Reference

[1] Suzuki K et al. (2000) Complete nucleotide sequence of a plant tumor-inducing Ti plasmid. Gene. 242(1-2):331-6. [PMID:10721727]