Detailed information of relaxase

Relaxase

• ID: 367
• GenBank: YP_001965642
• Name: TraA_pSmeSM11b
• UniProt ID: A4KVP8
• Family: MOB_Q
• PDB ID: _
• Length: 1210 a.a.
• Note: putative relaxase

Protein sequence

• Length: 1210 a.a.
• Molecular weight: 134098.77 Da
• Isoelectric Point: 7.6395

>YP_001965642.1 TraA (plasmid) [Sinorhizobium meliloti SM11]
MAVPHFSVSIVARGSGRSAVLSAAYRHCAKMDFEREARTIDYTRKQGLLHEEFVIPEDAPEWLRAMISDR
SVSGASEAFWNSVEAFEKRSDAQLAKDVTIALPIELSAEQNIDLVQDFVARHITAQGMVADWVYHDAPGN
PHIHMMTTLRPLTDDGFGSKKVAVLGPDGRPQRNDAGKIVYELWAGGADDFNAFRDGWFACQNRHLALAG
LDIRVDGRSFEKQGIALEPTIHVGVGATAIERKADTAVETASAAAVKLERIELQEERREENARRIQRDPG
LVLDLITREKSVFDERDIARVLHRYIDDPALFQDLMARVLQHPDALRLDSERISFSTGARSPAKYTTYDL
IRIEAEMAQRALWLGRQHSYHVPTRVLGQVFKRHDRLADEQKSAIQHISRDVGIAAVVGRAGAGKTTMMK
AAREAWEAAGYRVVGAALAGKAAEGLEKEAGTASRTLSAWELRWDQDRDNLDDKTVMVLDEAGMVSSRQM
ARFVEAATISGAKLVLVGDPDQLQPIEAGAAFRAISERIGYAGLETIYRQREQWMRDASLDLARGNVSAA
LAAYEQRDMVRTGWTRDDAITTLIADWDRDYDPAKSSLILAHRRRDVRMLNEMARDKLVERGLIEKGHAF
KTEEGSRQFAVGDQIVFLKNEGSIGVKNGMLARVVEAQPGRLVAEIGSGDDCRQVVVEQRFYANVDHGYA
TTVHKSQGATVDRVKVLASSTLDRHLAYVAMTRHREAAELYVGLEEFAQRRGGVLIAHGEAPFEHKPGNR
SSYYVTLGFANGQEHTLWGVDLARAMDVADARIGDRIGIEHAGSERVRLPDGTEANRNSWKVVPVEDLAM
ARMHERLSRDASKETTLDYQNASSYRAALRFADRRGLHLMSVGRTLLRDRLQWTIRQKEKLTDLMSRLAA
VGERLGLRPSVGGERQVRGASEIRNQTNSIIQEDRKPMVAGITTFAKSIEKSVEDKVSADPALKSQWQEV
SARFHLVYADPQAAFNAVNVDAMVGSSETAKATLATISRQPVTFGPLKGKTGLFAGKADSQARETALVNV
PALARDLDEYLQKRAEAERRYEAEERAVRLKVSIDIPALSGAAKQTLERVRDAIDRNDLPSGLEYALADK
MVKAELEGFAKAVSERFGERTFLPLAAKEADGKVFEKLSAGMAPAQKAELHSAWNTMRTVQRLSAHERTA
TALKQAEIMRQAKTTGLSLK

Protein domains

Predicted by InterproScan

• AAA domain (AAA_30) (387-573)

• BID domain of Bartonella effector protein (Bep) (Bep_C_terminal) (966-1062)

• Viral (Superfamily 1) RNA helicase (Viral_helicase1) (697-740)

• MobA/MobL family (MobA_MobL) (17-243)

Protein structure

• AlphaFold DB: A4KVP8