Detailed information of relaxase

Relaxase

• ID: 35
• GenBank: NP_990929
• Name: TraI_pEST4011
• UniProt ID: Q6QHL4
• Family: MOB_P
• PDB ID: _
• Length: 730 a.a.
• Note: relaxase

Protein sequence

• Length: 730 a.a.
• Molecular weight: 80105.51 Da
• Isoelectric Point: 10.3299

>NP_990929.1 TraI (plasmid) [Achromobacter denitrificans]
MIAKHVSMKTVQKSDFAGLVKYITDEQAKNERVGYVAVTNCHTDRPEVAITEVLNTQAQNTRSGADKTYH
LIVSFRPGEQPDDATLKAIEARICEGLGFGEHQRVSAVHHDTDNLHIHIAINKIHPTRYTILEPFNAYHT
LGQLCEKLEREYSLERDNHQGNKLVSEGRAQDMERHASVESLQGWVKRECAADMQAAQSWDALHQVMRDN
GLELRERGNGFVIQAADGLDVKASSIGREFSKAKLEERLGTFEPSAEHLERAAQKPRKQYDKKPVRSRVN
TVELHAKYKADQLTISGSRTAEWEKARAKKDRLIEAAKRSGRLKRSTIKLISGAGVGKKLMYSATSKTMK
SEIEKINKQYLKERQEIHEKYQRRAWADWLRAKAAEGDQEALGALRARDAAQGLKGNTVAGTGPLRPQAA
AAEQDSVTKKGTIIYRVGPTAVRDDGDRLKVSRGADQDGMQAALRMAMDRYGDRISVGGTPAFKEQIAQA
AAASKLPITFDDDALERRRQELLTQATTKENDHDRTDRGRAAGGGISGSGPAIAAIPGAARAGQPRAAAA
GRTTKPNVGRVGRKPPPQSQNRLRRLSQLGVVQLASGSEVLLPRHVPGDVEQQGAKPVDGLRRDIFGPGR
LSPQVAAAADKYIAEREGKRLKGFDIPKHSRYTDGQDGAATFAGIRQVEGQSLALLTRGEEVMVLPVDEP
TARRLKRLAVGDAITVTPQGSIKTTKGRSR

Protein domains

Predicted by InterproScan

• Large polyvalent protein-associated domain 7 (LPD7) (424-512)

• Relaxase/Mobilisation nuclease domain (Relaxase) (13-250)

Protein structure

• AlphaFold DB: Q6QHL4

Reference

[1] Vedler E et al. (2004) The completely sequenced plasmid pEST4011 contains a novel IncP1 backbone and a catabolic transposon harboring tfd genes for 2,4-dichlorophenoxyacetic acid degradation. J Bacteriol. 186(21):7161-74. [PMID:15489427]