Detailed information of relaxase

Relaxase

• ID: 3109
• GenBank: WP_068951002
• Name: traA_ADU59_RS01115_pF5.1b
• UniProt ID: A0A546YXT6
• Family: MOB_Q
• PDB ID: _
• Length: 1100 a.a.
• Note: Predicted by oriTfinder 2.0

Protein sequence

• Length: 1100 a.a.
• Molecular weight: 123345.21 Da
• Isoelectric Point: 10.0430

>WP_068951002.1 MULTISPECIES: Ti-type conjugative transfer relaxase TraA [Rhizobium/Agrobacterium group]
MAIAHFSASIVSRGGGRSVVLSAAYRHCAKMEYEREARTIDYTRKQGLVHEEFMLPADAPKWVRAMIADR
SVAGASEAFWNKVEAFEKRADAQLARDLTIALPLELPAEQNIALVRDFVEKHILAKGMVADWVYHDNPGN
PHIHLMTTLRPLTGDGFGTKKVAVIGEDGQPVRTKSGKILYELWAGSTDDFNVLRDGWFERLNHHLALGG
IDLRIDGRSYEKQGIDLEPTIHLGVGAKAIERKAKEQGIRPELERIELNEDRRSENARRILRRPEIVLDL
ITREKSVFDERDVAKVLHRYVDDPALFQQLMLRIILNPEVLRLQRDTIDFSTGQKVPARYSTRAMIRLEA
TMVRQTTWLSGKETHAVSASVLDTTFQRHARLSEEQKTAIERIAGPTRIAAVVGRAGAGKTTMMKAAREA
WELAGYRVVGGALAGKAAEGLEKEAGIHSRTLASWELRWNRGRDVLDRKTVFVMDEAGMVASKQMARFVD
TAVRAGAKIVLVGDPEQLQPIEAGAAFRAIVDRIGYAELETIYRQREDWMRKASLDLARGNVEKALTAYD
ANVRITGTRLKAEAVERLIGDWNHDYDQTKTTLILAHLRRDVRMLNVMAREKLVERGVVGEGHVFKTADG
IRQFDAGDQIVFLKNETSLGVKNGMIAHVVEAAPNRIVAVVGEGDKRRQVIVEQRFYSNLDHGYATTIHK
SQGATVDRVKVLASLSLDRHLTYVAMTRHREDVQLYYGRRSFAFNGGLAKVLSRKNAKETTLDYERGKLY
REALRFAEGRGLNIVQVARTLVRDRLDWTLRQKMKLVELGQRLAVFAERLGLHHPLKTQTMKEAAPMVAG
IKTFSGSVADTLSDRLGADPALKQQWEEVSARFAYVFADPETAFRAMNFDAVLADKDSARQALGKLEAEP
ASIGALKGKTGILASKTEREARRVAELNVPALTRDLAQYLRMRETATQRMETEEQALRQRVSIDIPALSP
AACVVLERVRDAIDRNDLPAALGYALSNRETKLEIDGFNKAVTERFGERTLLTNAARQPSGTLFDKLSNG
MQPAQKEQLKEAWPVMRTTQQLAAHERTTQTLKQAEELRLSQRQSPVMKQ

Protein domains

Predicted by InterproScan

• Viral (Superfamily 1) RNA helicase (Viral_helicase1) (692-736)

• BID domain of Bartonella effector protein (Bep) (Bep_C_terminal) (855-951)

• MobA/MobL family (MobA_MobL) (17-243)

• AAA domain (AAA_30) (382-567)

Protein structure

• AlphaFold DB: A0A546YXT6