Detailed information of relaxase

Relaxase

• ID: 2154
• GenBank: WP_060560562
• Name: traI_AR325_RS26730_B3R3|unnamed1
• UniProt ID: _
• Family: MOB_F
• PDB ID: _
• Length: 1768 a.a.
• Note: Predicted by oriTfinder 2.0

Protein sequence

• Length: 1768 a.a.
• Molecular weight: 189688.06 Da
• Isoelectric Point: 6.4414

>WP_060560562.1 conjugative transfer relaxase/helicase TraI [Serratia marcescens]
MMSIGQVGPAGKAGDYYTHQDNYYVLGSMDERWVGQGAEALGLSGKVDVKDFVAVLEGKLPDGSDLTRMV
GGENKHRPGYDLTFSAPKGISVLAMLGGDKRLIAVHNHAVEVAVREVEKLASTRVMEGGVSETKLTGNLV
VALFNHDTSRDLDPQLHTHAVVANVTQHDGKWQTLSSDTVGKTGFIESVYANQVTFGQIYRHVFRQDVEA
MGYKTKTVGPHGMWEPDNMDSVIDVFSKRSHAIDAAAGPDASLKSRDMATLDTRKAKVASDPAALAVVLM
QEMKATGFDIQAYMAEAQSRTMVTPSPTLLEAGGDVLVDQAVGKAISALSDRQVNFTHNQVANKAISYLS
GEPGMLDAVRDGIDRAIEREQLIPLDKEKGVFTSDIHLLDELSVAQLSRTHLDESAVVIGAPKSDPRTGS
IPTYSDAVQQLAQHAPTMAVLSGIGGASVNRSRVAEVVELAREQGRDATVLTVDRQSQQYLQQSIHLDEG
RVVTRAALGTEALFAPNSTLVVDQAEKLTLKETVALLDGAVRNNVQLVLMDTEKRKGTGNALAVMKEAGV
PRYQFSGRQAVPAEMVSEPDKAQRFGQLAKGVVQALLEDRPAVAQVNGPADQRMLTAMIRNELKDAGLLG
REETHVATLTPVWLDSKNRGAIDTYREGMVMERWDAESQQRERFVIDRVGAQTRNLVLRNAEGEKHTLAV
KAVDKDWSLFRAGTMGVADGERLRVLGQEGRGKDALKAGTALTVVRAGAGELQVRVAGEPDATQKPADRA
LAVGSDVFSAVKVAPVYVESLGASVSSTAAVYAAVKKNELNSATLSGIARSGGHITLYSALDARKTQEKV
AQHPAYRLAGEQVKQLAGEEGLDAAIAGQKSGLFTPAQQAIHLAIPTLEGDSVAFGQARLLAGSLGFAAK
GVSMKAIQTEIEAQVKRGELLKVDVAPGVGADLLVSRASFEAEKSIIRLIADGKDSLPPLVTTSSKTHNE
DGPGQREGKVAPYLTQGQRQAVDLILNTTDRFVAIQGYAGVGKTTQVKAVLDGIAQLPESERPRVVGLAP
THRAVGEMQAAGVDAQTLASFLHDEGLKVAGGEKPDYRNTLFVVDESSMVGNSDMARAYALIAEGNGRAV
MSGDEAQLEAIAPGAPFRLAQGRSAIDMAVMKEIVRQTPELKPAVYKMIDNDVPGALDVVRAVVPANVPR
QADAWVPVQSVVEYPAKGSDDIHAAIVSDYLGRTEAARRDTLIITHLNADRHIINAGIHQERKAAGELKG
ASVNLPILETANIRDGELRKLDTWARHRDAVVLLDNTYYRMAGIDSQSRTVSLHDSEGNTRQFSPASAVR
EGVTLYNPRTIEVNVGDRMRFSKSDVERGHVANSTWTVEAIKGDVVTLSDGQQTRTVNPREQQQDRHVDL
AYAITAHGAQGASERFAITLEGVEGGREQLVNRASAYVALSRAKEHVQVYTDNETGWLNAIGKAKARTTA
HDAVLGMAPGSQKAAADLYGKAEPLAGNALGRAVLRGSQLTGDTLAHYVSPGKKYPQPHAMLPMYDANGK
PAGAWLAPLADTQGKSVGGLPTQGRVLGSDSAQFVALQGSRNNETRLAGTMQDGIRLAARYPDSGVVVRL
QGDDVPFNPQAMTGGRVWVNDETLKATARESCASDSVIKLPESPEERLQRELQTQADKLGREPNAPDPQR
LAGLNDEQLRALLVRGELRAEDVKARLPEAVMREVMGQGAALRVDAAVRQVARAPVSTRSRLQQDEQNLV
RDTHAERELNKEKTLGGD

Protein domains

Predicted by InterproScan

• DNA relaxase TraI 2B/2B-like domain (TraI_2B) (638-716)

• AAA domain (AAA_30) (994-1180)

• TrwC relaxase (TrwC) (10-280)

• single-stranded DNA binding TraI N-terminal subdomain (ssDNA_TraI_N) (580-632)

• DNA helicase TraI (TraI_C) (1438-1557)

Protein structure

No available structure.