Detailed information of relaxase

Relaxase

• ID: 214
• GenBank: AAV52093
• Name: TraA_pNoc614
• UniProt ID: Q5U9L8
• Family: MOB_F
• PDB ID: _
• Length: 1818 a.a.
• Note: putative TraA conjugation protein

Protein sequence

• Length: 1818 a.a.
• Molecular weight: 195865.85 Da
• Isoelectric Point: 5.0409

>AAV52093.1 putative TraA conjugation protein [Nocardioides sp. JS614]
MPVTMSLHKLTAGSGYDYLTRQVAAMDATDKGHTGLASYYTEKGETPGVWVGSGMEGIEGLDAGDVVTAD
HMQNLFGAGHHPLATARTKELDLRVGRAGVGSPTAADYKAAARLGTPFKVYENDVSAFRVEVAKRLAAVN
EAAGLPGDWPVPAEERARIRTEIGRDFFRAEHGREPADARELAATIAKHSRPKTNAVAGYDLTFSPVKSV
STLWALADPKTAAVIEGAHQSAIKDALNFIETKALFTRQGTNGIRQVNVRGLLATAFTHRDSRAGDPDLH
THVAVANKVQTLDGKWLAIDGRLLYKAKVSASETYNTALERHLGDALGGTVRGTAESRRPEAAGARDRRL
SYPDLNHRFLQAPRSASKPAARSWPPSSRRPTAARRHRIETLQLAQRATLETREAKHEPRSLNDQREAWD
REAVEVLGSPRGLQQMLHGTLNPTAAGTAPVADAAWFAKTGDRIVTTMEGGRATWQYWHVYAEAQRQVRA
ANVPTDQVSTVVGLLVSEVLDGRSVSITRPFDEISEPPELRKLDGASVYTVGGVHLFTSSKVLAAEERLV
EAAGRRDGYAVDEQNVALALLESEANGVTLNAGQATLVKEMATSGARLQLAIAPAGSGKTTAMRALAQAW
TDGGGSVIGLAPSAAAADALRVSMGSQIDTQTDTLAKLTHSLEQSQVTGAEVPDWVAGIGPQTLVVIDEA
GMADTLSLDIAVQHVLERGGSVRLVGDDQQLAAIGAGGVLRDIRATHGALQLTELVRFTDPAEGAASLAL
REGKGEALGFYLDRDRVHVGDLATMTEDVFAAWQADRAAGLDAIMLAPTRELVSELNQQARAHRLEGADP
ASVGPARRLADGNEASIGELIITRTNDRKLRTSATDWVKNGDRWTVLGLHEGGDLTVQHTQHGRTVRLPR
EYVETSTELGYACTVHTAQGVTTDTMHGLATGNESRQQLYTMLTRGKSGNHIYLQVVGDGDPHSVIHPTL
VRPLTPTDILESMLARDDAQRSATSLMREQADPATQLGEAAQRYLDSLYVAAENHLRNTAGPDGSNVVEA
LDSTVDQLLPGLADEAAWPTLRAHLLLLGAAGENPVEAMRAAASDRELVSAEDRAAVLDWRLDASGMRNV
GTGPLPWIPGVPERLADDPHWGAYLDQRAHLVDQLADEVRGRAAAQTSLPTWAQNGIRPDTDTVADVEVW
RAAMQVPLDDRRPTGAPQLQKASSTYQRRLNRRITGDHTPALTEWRQLLYSLAPQVRGDEFTPLLAERLA
AMSRAGVEAHQLLRTATAADTGAGPLPDEHAAAALWWRMARHLSPAVAAQVGDGSHGEGVTTSWAAQLPE
LLSDERSARIQASAWWPALVSNIDHGLQRGWQLEALLSAGSALPSDDIDECQALVWRTSIALEPIPDEHE
HDDHFDEPPVDMWDGVEPDPATLVDHPDDTEWPLPHDLEADGDHLVDHPEPDEAIDQVDVAPAAADNVDE
QQFVEGDLTLAAYIRDLGGTPLEPTAADIRLMYQRADEWYSFPVTRERMIEINEITQTFFESRFTDSWGR
DYLTGRFGIDLAGHEHFRPGQAPAGWTNLVDHLRHRGVSGAEMLATGVATTASTGRLIDRFRDRVMFPVV
HNGEVLGFVGRRRPELTDADQANGRGGPKYLNTADTPLFHKGAQLYGVVDELLAEGAVPVIVEGPMDAIA
VTLASAARYVGVAPLGTSLTDEQASQLGGIGRDPIVATDADLAGEVAAERDFWMLTPHGLDPGYARFPEG
LDPADLLAQRGPAALTASLASGQTLGDQLLSERLDNLAPEQARVAAMRVLAARPSRAWRRAPTWCAPD

Protein domains

Predicted by InterproScan

• AAA domain (AAA_30) (589-791)

• DNA primase catalytic core, N-terminal domain (DNAG_N) (1532-1658)

• Toprim-like (Toprim_2) (1670-1757)

• TrwC relaxase (TrwC) (12-425)

Protein structure

No available structure.

Reference

[1] Mattes TE et al. (2005) Physiological and molecular genetic analyses of vinyl chloride and ethene biodegradation in Nocardioides sp. strain JS614. Arch Microbiol. 183(2):95-106. [PMID:15599705]