Detailed information of relaxase

Relaxase

• ID: 144
• GenBank: YP_534815
• Name: TraC_NAH7
• UniProt ID: Q1XGM7
• Family: MOB_F
• PDB ID: _
• Length: 978 a.a.
• Note: relaxase

Protein sequence

• Length: 978 a.a.
• Molecular weight: 108592.12 Da
• Isoelectric Point: 9.9224

>YP_534815.1 putative plasmid transfer protein TraC (plasmid) [Pseudomonas putida]
MFNVTSIKGSNQYAAAGYYTAADDYYAKESPGEWQGIGAELLGLAGPIDQKELAKLFDGKLPNGEVMPKT
FDKETGNRRMGLDLTFSAPKSVSMQALIAGDKDVVAAHDRAVTKAMEHVEKLAQARRKEHGKSMLERTGN
LIIGKFRHELSRAKDPQLHTHAVVMNATRREDGKWRAIHNDDIFKIQPQIDAMYKGELAKELRELGYEIR
VLDKDGNFELAHISRDQIEAFSSRAKVIEEALAKDGKTRSNATALEKQIIAMATRPRKDERDRHLVKEYW
VTKARDLGIEFGGRSQLDNQEYGRRSESIHAEHNLPEGITAGQAVVQYAINHLTEREQVVGESDLRTAAL
RRAVGLASPSEVDDEIKRLVKQGTLIESPPTYRMATGKDGAALSPAGWRALLKEQKGWSEKEAQQYVKMA
INRGSLVEAEKRYTTQRALKREKAILAIERSGRGQVAPLLSKEQVAKALESSTLSAGQYQAVEVIVSTSN
RFVGIQGDAGTGKTYSVDRAVKLIESVNNAMTERSTTTDAVFRVVALAPYGNQVTALKNEGLDAHTLASF
FHTKDKKLDERTIVVLDEAGVVGARQMEQLMRIIEQSGARLVQLGDTKQTEAIEAGKPFAQLQQNGMQTA
RIKEIQRQKNQELKIAVQHAADGNPGKSLEHVNHVEELREPGQRHQAIVRDYMSLTPQERKEVLIVAGTN
KDRKQINAMTRESLGLVGNGKELPTLNRVDTTQAERRYAPSYKKGMIVQPEKDYIRAGLSRGELYTVDQA
LPGNVLVVKDKNGNRVEFNPRKLTKLSVYNLEKPEFSVGDLVRITRNDQKLDLTNGDRMRVVGNANGVIE
LASLKEKDGTPERVVALPTNRPLHLEHAYSATVHSAQGLTNDRVMISINTKSLTTSQNLWYVAISRARHE
ARIYTDSIAGLPAAIANRYDKTTALSLQQARERQRNESIKPRTVLDGKELERKQRSALDGAGLGKSGV

Protein domains

Predicted by InterproScan

• TrwC relaxase (TrwC) (15-286)

• Viral (Superfamily 1) RNA helicase (Viral_helicase1) (869-915)

• AAA domain (AAA_30) (473-666)

Protein structure

• AlphaFold DB: Q1XGM7

Reference

[1] Sota M et al. (2006) Genomic and functional analysis of the IncP-9 naphthalene-catabolic plasmid NAH7 and its transposon Tn4655 suggests catabolic gene spread by a tyrosine recombinase. J Bacteriol. 188(11):4057-67. [PMID:16707697]