Detailed information of relaxase

Relaxase

• ID: 1077
• GenBank: WP_011053391
• Name: TraA_pRETCFN42d
• UniProt ID: Q8KIN6
• PDB ID: _
• Length: 1552 a.a.
• Note: (1) The relaxase TraA_pRETCFN42d has a nic site cis-acting preference [PMID:16916896]. (2) Overexpression of the yp028 gene promotes the conjugation pRetCFN42d, and this promotion effect is relaxase TraA_pRetCFN42d-dependent [PMID:15317780].

Protein sequence

• Length: 1552 a.a.
• Molecular weight: 171898.01 Da
• Isoelectric Point: 7.3779

>WP_011053391.1 Ti-type conjugative transfer relaxase TraA [Rhizobium etli]
MAIMFVRAQVISRGSGRSIVSAAAYRHRARMMDEQAGTSFSYRGGAGELMYEELALPDEIPDWLRSAISG
QSVSKASEVFWNAVDAFETRADAQLARELIIALPEELTRAENITLVREFVRDNLTSKGMIADWVYHDKDG
NPHIHLMTTLRPLTEEGFGAKKVPVLGEGGKPLRVVTPDRPNGKIVYKVWAGDKETMKAWKIAWAETANR
HLALAGHDIRLDGRSYAEQGLDGIAQKHLGPEKAALARKGRELHFAPADLARRQEMADRLLSEPELLLKQ
LGNERSTFDERDIARALHRYVDDPTDFANIRARLMASDQLVILKPQEIEAETGKVSEPAVFTTREMLRIE
YDMAQSARVLSERRGFGVSERNVTVAIERVESIESGDPKTPFRLDAEQVDAVRHVTGDGGIAAIVGLAGA
GKSTLLAAARLAWESEGHRVIGAALAGKAAEGLQDSSGIKSRTLASWELAWANGRDTLHRGDVLVIDEAG
MVASQQMARVLKIAEEAEVKVVLVGDAMQLQPIQAGAAFRAITERIGFAELAGVRRQREAWARNASRLFA
RGEVEKGLDAYARHGHLVEAGTREETIDRIVSDWAAARREAIERSTSEGRDGRLRGDELLVLAHTNDDVR
KLNEALREVMAGDNALGESRSFRTERGARKFAAGDRIIFLENARFLEPRAKHSGPQYVKNGMLGTVTATG
DKRGDPLLSVLLDNGNKVVFGEDSYDNVDHGYAATIHKSQGSTVDRTFVLATGMMDRHLTYVSMTRHRDR
VDLYAAKEDFEPRPEWGRKPRVDHAAGVTGELVETGEAKFRPEDEDADDSPYADVRTDDGTAHRLWGVSL
PKALDDAGISDGDTITLRKDGVERVKVQIAIVDEETGQKRYEEREVDRNVWTARQIETAEARQERIERES
HRPDVFSRLVERLSRSGAKTTTLDFESEAGYRAQAQDFARRRGLDHLSLAAAEMEESLSRRWTWITAKRE
QVEKLWERASVALGFAIERERRFAYNEARTESHTIASASAGEPQYLIPPSTSFVRSVEADARLAQRSSPA
WTERETMLRPLLTKIYRDPDAALVALNALASDTGTEPRRLTADLAAAPDRLGRLRGSELIVDGGAALSER
KVAKAALEELLPLARAHATGFRRNAERFEMREQTRRSYMSLSIPALSERAMPRLMEIEAVRNRDGDDAYK
SAFALAAEDRSVVQEIKAVSEALTARFGWSAFTAKADAVAERNMTERLPEDLTAGRREELARLFEAVKRF
AEAQHLAERQDRSKIVMAASVVRGQETENGPGKENVAVPPMLAAVIAFKTSVDDEARLRALSNPFYRQQR
GALANAATMIWRDPSGAVGKIEELLRKGFAADRIAAAVTNDPAAYGALRGSNRLLDRMLASGRERKEAMR
AVPETAARLRALGAAHLNALDAERQAITDERRRMAVAIPALSKAAEEALAHLTVEVRKDSRKLSVSAASL
EQGIAREFAAVSRALDERFGRNALVRGDKDLVNRVPPAQRRAFEAMQERLKVLQQTVRLQSSEQIIAERR
QRAASRARGINL

Protein domains

Predicted by InterproScan

• MobA/MobL family (MobA_MobL) (17-249)

• BID domain of Bartonella effector protein (Bep) (Bep_C_terminal) (1322-1412)

• BID domain of Bartonella effector protein (Bep) (Bep_C_terminal) (1053-1130)

• AAA domain (AAA_30) (394-580)

Protein structure

No available structure.