Detailed information of relaxase

Relaxase

• ID: 1075
• GenBank: WP_011427443
• Name: TraA_pRet42a
• UniProt ID: Q2K2P2
• PDB ID: _
• Length: 1103 a.a.

Protein sequence

• Length: 1103 a.a.
• Molecular weight: 122254.41 Da
• Isoelectric Point: 9.7588

>WP_011427443.1 MULTISPECIES: Ti-type conjugative transfer relaxase TraA [Rhizobium]
MAVPHFSVSVVARGSGRSAVLSAAYRHCAKMEFEREARTIDYTRKQGLLHEEFVIPADAPDWLRSMIADR
SVSGASEAFWNKVEGFEKRSDAQLAKDVTIALPIELTAEQNIALVRDFVEQHITANGMVADWVYHDAPGN
PHVHLMTTLRPLTADGFGAKKVAVTGPDGNPIRNDAGKIVYELWAGSIDDFNAFRDGWFACQNRHLALAG
LDIRVDGRSFEKQGIDLEPTIHLGVGTKAIERKSDGAPKPIELERLELQNARRSENVRRIDRNPELVLDL
IMREKSVFDERDVAKILHRYVDDAVLFQSLMVRILLCPETFRIERERVDLASGTREPAKYTTRDMIRLEA
EMANRAVWLSQRSSHGVRDTVLAATFERHERLSDEQKTAIEHVAGTERIAAVIGRAGAGKTTMMKAAREA
WEAAGYRVVGAALAGKAAEGLEKEAGIISRTLASWELRWNQGRDQLDSKTVFVLDEAGMVSSRQMALFVE
AVTKAGAKLVLVGDPEQLQPIEAGAAFRAIADRIGYAELETIYRQRQQWMRDASLDLARGKVGKAIDAYR
ANGRVIGSDLKAEAVDNLIAAWDRDYDPTKTSLILAHLRRDVRMLNQMARIKLIERGILGEGSMFKTADG
SRNFAVGDQIVFLKNEGSLGVKNGMLAKVVEAGPGRIIALIGDGENARKVLVEQRFYDNLDHGYATTIHK
SQGATVDQVKVLASLSLDRHLTYVAMTRHREDLAVYYGRRSFAKNGGLIPILSRRNAKETTLDYEKSAFY
RAALRFAETRGLHLVNVARTLVRDRLEWVVSQKQKLANLGARLAAVADRLRLVRGVAQSPIQNSNKEAKP
MVSGITTFAKSVDQAIEDKVAADPGLKKQWEEVSARFHLVYAQAESAFKAVNVDAMLKNETVAKSTLTKL
GSEPESFGALKGKTGILASRSDKQEREKAQTNAPALARNLERYLRQRAEAERKFEVEERAVRLKVSIDIP
ALSPNAKQTLERVRDAIDRNDLPAGLEYALADKMVKAELEGFAKAVSERFGERTFLSLAAKDPNGQTFNA
VTSGMTAGQKAEVQSAWNMIRTVQQLAAHERTTEALKQAEALRQTKSQGLSLK

Protein domains

Predicted by InterproScan

• AAA domain (AAA_30) (382-567)

• MobA/MobL family (MobA_MobL) (17-243)

• BID domain of Bartonella effector protein (Bep) (Bep_C_terminal) (859-955)

• Viral (Superfamily 1) RNA helicase (Viral_helicase1) (692-735)

Protein structure

• AlphaFold DB: Q2K2P2

Reference

[1] Laura Cervantes et al. (2019) Plasmid pSfr64a and the symbiotic plasmid pSfr64b of Sinorhizobium fredii GR64 control each other's conjugative transfer through quorum-sensing elements.. Plasmid. 106:102443. [PMID:31689451]