Detailed information of oriT
oriT
The information of the oriT region
| oriTDB ID | 300462 |
| Name | oriT_pBT20-Dbla-T7pol  |
| Organism | Expression vector pBT20-Dbla-T7pol |
| Sequence Completeness | |
| NCBI accession of oriT (coordinates [strand]) | EF153732 (_) |
| oriT length | 242 nt |
| IRs (inverted repeats) | |
| Location of nic site | |
| Conserved sequence flanking the nic site |
|
| Note | oriT_RP4 ? |
oriT sequence
Download Length: 242 nt
>oriT_pBT20-Dbla-T7pol
TTTCCGCTGCATAACCCTGCTTCGGGGTCATTATAGCGATTTTTTCGGTATATCCATCCTTTTTCGCACGATATACAGGATTTTGCCAAAGGGTTCGTGTAGACTTTCCTTGGTGTATCCAACGGCGTCAGCCGGGCAGGATAGGTGAAGTAGGCCCACCCGCGAGCGGGTGTTCCTTCTTCACTGTCCCTTATTCGCACCTGGCGGTGCTCAACGGGAATCCTGCTCTGCGAGGCTGGCCG
TTTCCGCTGCATAACCCTGCTTCGGGGTCATTATAGCGATTTTTTCGGTATATCCATCCTTTTTCGCACGATATACAGGATTTTGCCAAAGGGTTCGTGTAGACTTTCCTTGGTGTATCCAACGGCGTCAGCCGGGCAGGATAGGTGAAGTAGGCCCACCCGCGAGCGGGTGTTCCTTCTTCACTGTCCCTTATTCGCACCTGGCGGTGCTCAACGGGAATCCTGCTCTGCGAGGCTGGCCG
Visualization of oriT structure (The oriT was characterized experimentally)
oriT secondary structure
Predicted by RNAfold.
Download structure file
Host bacterium
| ID | 675 | GenBank | EF153732 |
| Plasmid name | Expression vector pBT20-Dbla-T7pol | Incompatibility group | - |
| Plasmid size | 9952 bp | Coordinate of oriT [Strand] | |
| Host baterium | Expression vector pBT20-Dbla-T7pol |
Cargo genes
| Drug resistance gene | - |
| Virulence gene | - |
| Metal resistance gene | - |
| Degradation gene | - |
| Symbiosis gene | - |
| Anti-CRISPR | - |