Detailed information of oriT

oriT


The information of the oriT region


oriTDB ID   200301
Name   oriT_ICE_EfmISMMSVRE1_rpsI in_silico
Organism   Enterococcus faecium strain ISMMS_VRE_1
Sequence Completeness      -
NCBI accession of oriT (coordinates [strand])   CP012430 (56381..56423 [+], 43 nt)
oriT length   43 nt
IRs (inverted repeats)     _
Location of nic site      _
Conserved sequence flanking the
  nic site  
 
 _
Note   Predicted by oriTfinder 2.0

  oriT sequence  


Download         Length: 43 nt

>oriT_ICE_EfmISMMSVRE1_rpsI
CAAGGTGTTAACTTTTTCAAATGAGTTAACACCTATACAAATT

Visualization of oriT structure

  oriT secondary structure

Predicted by RNAfold.

Download structure file


Relaxase


ID   14338 GenBank   AOM17644
Name   MobA_MobL_AL014_12815_ICE_EfmISMMSVRE1_rpsI insolico UniProt ID   _
Length   401 a.a. PDB ID   
Note   Predicted by oriTfinder 2.0

  Relaxase protein sequence


Download         Length: 401 a.a.        Molecular weight: 47207.12 Da        Isoelectric Point: 10.4368

>AOM17644.1 transposase [Enterococcus faecium]
MKREVKKFRDCGDLKKGYRLFVCEGCHDVKKVAFRCKGKFCPTCATGESQRWAEVAANDLFTVTHRHVIF
TIDEGLREIFLKEKYRKELLKGLMDEAARILLDFFRKHHIQAGVVATLHTFGSQLEYNPHVHLVVTMGGL
TKDGKWKDYDYFPFAMLRKYWQNAVLKLIRRTLSQWDKARVQPLLQAAYTKNAEGFYVHAPKRSRTSLKK
ILEYISRYMKRGPIALNRILLYDGKIVMFQYHDKRTNTDKIKTMSAEEFIGALIRHIPENQFKTIRRYGI
YSRRIKTTMKKVLSNYQKEIQRMLVNVKKALKPKSWCERIAEEFGVNPLECTRCGEYYEFSGVSVSKNGR
LVVKYAKNKESERFMREENKKIGEEASKRKYEKEAAFKKLRFQWSGSLHLS

  Protein domains


Predicted by InterproScan.

(113-284)

(2-72)


  Protein structure



No available structure.



ID   14339 GenBank   AOM17109
Name   Rep_trans_AL014_12915_ICE_EfmISMMSVRE1_rpsI insolico UniProt ID   _
Length   394 a.a. PDB ID   
Note   Predicted by oriTfinder 2.0

  Relaxase protein sequence


Download         Length: 394 a.a.        Molecular weight: 46554.57 Da        Isoelectric Point: 9.2156

>AOM17109.1 Cro/Cl family transcriptional regulator [Enterococcus faecium]
MAQRNLDYRLLKDRRNEYGVSQNKLATACGLSRPYLNQIENGGVTASIKTMRKIFDQLESFNPDLPLTLL
FDYVRIRFPTTDARKIIQEILHLKFEYMLHEDYAFYSYQEQYVMGDIVVMLSHEEDKGVLLELKGRGCRQ
FETFLLAQKRSWYDFFEDCLKAGGVMKRLDLAINDRVGLLDIPELTKKCQKEECISLFRTFKSYRSGELL
KADEKDGMGNTLYIGSLKSEVYFCLYEKDYEQYIKLGIPLDQTETKNRFEIRLKNDRAFHAIQDLLKGRS
IESTTFSIINRYLRFADKVEGKRRTNWPLNEQWGRFIGRNRKEIQLTSEPKPYTIERTLNWLGRQVAPTW
KMAKELDRLNRTTYIQDMVQNARLSDRHKKILEQQSMAIENLII

  Protein domains


Predicted by InterproScan.

(69-157)

(165-369)

(11-58)


  Protein structure



No available structure.




T4CP


ID   16831 GenBank   AOM17114
Name   tcpA_AL014_12940_ICE_EfmISMMSVRE1_rpsI insolico UniProt ID   _
Length   446 a.a. PDB ID   _
Note   Predicted by oriTfinder 2.0

  T4CP protein sequence


Download         Length: 446 a.a.        Molecular weight: 51763.21 Da        Isoelectric Point: 7.0138

>AOM17114.1 cell division protein FtsK [Enterococcus faecium]
MYKGHRIRAGDQHLVYHFVLGWLLALFIGWMSVFYFQEFRQFDISKLSLSTIEIVWSIKDLVCLLGSLAF
SGAMILLYIHFFLDHWRSLWHRQKLARMILENHWYEVKQTQSEGFFKDLNSSRTRETISYFPKIYYRMKD
GLLSIRVQISLGKYQDQLLKLEKKLESGLYCELVEKELKDSYVEYTLLYDMIANRIGIDEVVAENGTLRL
MKNQVWAYDSLPHMLIAGGTGGGKTYFLLTIIEALLKSDAELFILDPKNADLADLGTVMPHVYSQKEEIS
ACVEDFYERMMARSKAMKEMSNYKTGENYAYLGLPPNFLIFDEYVAYMEMLTTKESAVILNKLKQIVMLG
RQSGFFLILACQRPDAKYLGDGIRDQFNFRVALGRMSELGYSMMFGEVEKNFFMKHIKGRGYVDTGGSVI
SEFYTPLVPKGYDFLDSISKLEKMND

  Protein domains


Predicted by InterproScan.

(217-299)

  Protein structure



No available structure.




T4SS


T4SS were predicted by using oriTfinder2.

Region 1: 2173395..2601155

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
AL014_10895 2169628..2171001 - 1374 AOM16742 tetracycline resistance protein -
AL014_10900 2171099..2173018 - 1920 AOM16743 tetracycline resistance protein tetM -
AL014_10905 2173395..2174309 - 915 AOM16744 conjugal transfer protein orf13
AL014_10910 2174324..2175325 - 1002 AOM16745 peptidase P60 orf14
AL014_10915 2175322..2177505 - 2184 AOM16746 hypothetical protein orf15
AL014_10920 2177508..2179955 - 2448 AOM16747 ATP/GTP-binding protein virb4
AL014_10925 2179939..2180331 - 393 AOM16748 hypothetical protein orf17a
AL014_10930 2180418..2180915 - 498 AOM16749 antirestriction protein ArdA -
AL014_10935 2181032..2181283 - 252 AOM16750 conjugal transfer protein orf19
AL014_10940 2181359..2183269 - 1911 AOM16751 reverse transcriptase -
AL014_10945 2184053..2185258 - 1206 AOM16752 Cro/Cl family transcriptional regulator -
AL014_10950 2185437..2186822 - 1386 AOM16753 cell division protein FtsK virb4
AL014_10955 2186851..2187237 - 387 AOM16754 conjugal transfer protein orf23
AL014_10960 2187253..2187567 - 315 AOM16755 conjugal transfer protein orf23
AL014_10965 2187920..2188399 - 480 AOM16756 50S rRNA methyltransferase -
AL014_10970 2188827..2190116 + 1290 AOM16757 serine protease -
AL014_10975 2190155..2190760 - 606 AOM16758 tRNA-binding protein -
AL014_10980 2190956..2191420 - 465 AOM16759 universal stress protein UspA -
AL014_10985 2191442..2191762 - 321 AOM16760 thioredoxin -
AL014_10990 2191905..2192984 - 1080 AOM16761 glutamyl aminopeptidase -
AL014_10995 2193184..2193534 + 351 AOM16762 peptidase -
AL014_11000 2193719..2194672 + 954 AOM16763 glycosyl transferase -
AL014_11005 2194685..2196472 + 1788 AOM16764 hypothetical protein -
AL014_11010 2196459..2197661 + 1203 AOM16765 hypothetical protein -
AL014_11015 2197866..2199161 + 1296 AOM16766 transposase -
AL014_11020 2199259..2200677 - 1419 AOM16767 dipeptidase PepV -
AL014_11025 2200826..2201671 + 846 AOM16768 carbohydrate kinase -
AL014_11030 2201675..2202115 + 441 AOM16769 acyl-CoA thioester hydrolase -
AL014_11035 2202192..2202359 + 168 AOM17632 hypothetical protein -
AL014_11040 2202495..2203181 + 687 AOM16770 GntR family transcriptional regulator -
AL014_11045 2203589..2204278 - 690 AOM16771 hypothetical protein -
AL014_11050 2204253..2206382 - 2130 AOM16772 hydantoinase -
AL014_11060 2207423..2208610 + 1188 AOM16773 transposase -
AL014_11070 2209494..2209853 - 360 AOM16774 50S ribosomal protein L20 -
AL014_11075 2209906..2210106 - 201 AOM16775 50S ribosomal protein L35 -
AL014_11080 2210178..2210702 - 525 AOM16776 translation initiation factor IF-3 -
AL014_11085 2211022..2211654 + 633 AOM16777 hypothetical protein -
AL014_11090 2211656..2212561 - 906 AOM16778 magnesium transporter CorA -
AL014_11095 2212646..2213305 - 660 AOM16779 deoxyadenosine kinase -
AL014_11100 2213621..2214565 + 945 AOM16780 mevalonate kinase -
AL014_11105 2214558..2215535 + 978 AOM16781 diphosphomevalonate decarboxylase -
AL014_11110 2215548..2216633 + 1086 AOM16782 phosphomevalonate kinase -
AL014_11115 2216630..2217694 + 1065 AOM16783 isopentenyl pyrophosphate isomerase -
AL014_11120 2217943..2218746 - 804 AOM16784 gluconate 5-dehydrogenase -
AL014_11130 2219053..2219277 - 225 AOM16785 hypothetical protein -
AL014_11135 2219303..2220109 - 807 AOM16786 integrase -
AL014_11140 2220106..2220642 - 537 AOM16787 transposase -
AL014_11150 2221268..2221747 - 480 AOM16788 C4-dicarboxylate ABC transporter -
AL014_11155 2221753..2222610 - 858 AOM16789 hypothetical protein -
AL014_11160 2222794..2223900 - 1107 AOM16790 glycosyl hydrolase family 88 -
AL014_11165 2224129..2226726 - 2598 AOM16791 acetaldehyde dehydrogenase -
AL014_11170 2227031..2227411 - 381 AOM16792 preprotein translocase subunit YajC -
AL014_11175 2227508..2228653 - 1146 AOM16793 queuine tRNA-ribosyltransferase -
AL014_11180 2228871..2229569 + 699 AOM16794 hypothetical protein -
AL014_11185 2229737..2232376 - 2640 AOM16795 metal ABC transporter ATPase -
AL014_11190 2233018..2234313 - 1296 AOM16796 transposase -
AL014_11195 2234517..2235548 - 1032 AOM16797 S-adenosylmethionine tRNA ribosyltransferase -
AL014_11205 2236499..2237647 - 1149 AOM16798 transposase -
AL014_11210 2237664..2238068 - 405 AOM16799 transposase -
AL014_11220 2238811..2239452 + 642 AOM16800 choline ABC transporter permease -
AL014_11225 2239449..2240366 + 918 AOM16801 glycine/betaine ABC transporter substrate-binding protein -
AL014_11230 2240363..2241034 + 672 AOM16802 amino acid ABC transporter permease -
AL014_11235 2241575..2242063 - 489 AOM16803 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase -
AL014_11240 2242264..2242530 - 267 AOM16804 addiction module protein -
AL014_11245 2242530..2242793 - 264 AOM16805 prevent-host-death protein -
AL014_11250 2243269..2243454 + 186 AOM17633 transcriptional regulator -
AL014_11255 2243596..2245419 - 1824 AOM16806 amino acid permease -
AL014_11260 2246017..2248722 - 2706 AOM16807 phage infection protein -
AL014_11265 2249028..2249975 - 948 AOM16808 alcohol dehydrogenase -
AL014_11270 2250165..2250434 + 270 AOM16809 30S ribosomal protein S14 -
AL014_11275 2250610..2250972 - 363 AOM16810 PemK family transcriptional regulator -
AL014_11280 2250983..2252104 - 1122 AOM16811 alanine racemase -
AL014_11285 2252120..2252470 - 351 AOM16812 4'-phosphopantetheinyl transferase -
AL014_11290 2252600..2254111 - 1512 AOM16813 DEAD/DEAH box helicase -
AL014_11295 2254433..2255785 - 1353 AOM17634 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase -
AL014_11300 2255938..2257014 - 1077 AOM16814 D-alanine--D-alanine ligase -
AL014_11305 2257210..2258955 + 1746 AOM16815 ABC transporter -
AL014_11310 2259235..2259672 - 438 AOM16816 hypothetical protein -
AL014_11315 2259656..2261029 - 1374 AOM16817 hypothetical protein -
AL014_11320 2261351..2261839 - 489 AOM16818 GCN5 family acetyltransferase -
AL014_11325 2261861..2262463 - 603 AOM16819 hypothetical protein -
AL014_11330 2262562..2263098 + 537 AOM16820 transposase -
AL014_11335 2263095..2263901 + 807 AOM16821 integrase -
AL014_11340 2264386..2265015 - 630 AOM16822 uridine kinase -
AL014_11345 2265099..2265794 - 696 AOM16823 HAD family hydrolase -
AL014_11350 2265807..2266523 - 717 AOM16824 pseudouridylate synthase -
AL014_11355 2266853..2267458 + 606 AOM16825 50S ribosomal protein L25 -
AL014_11360 2267783..2268106 + 324 AOM16826 GTP cyclohydrolase -
AL014_11365 2268288..2269658 + 1371 AOM16827 diguanylate cyclase -
AL014_11370 2269788..2271089 - 1302 AOM16828 hemolysin -
AL014_11375 2271319..2273310 - 1992 AOM16829 potassium transporter Kup -
AL014_11380 2273454..2273720 - 267 AOM16830 hypothetical protein -
AL014_11385 2274230..2276356 - 2127 AOM17635 polynucleotide phosphorylase -
AL014_11390 2276544..2276813 - 270 AOM16831 30S ribosomal protein S15 -
AL014_11395 2277064..2277627 + 564 AOM16832 peptide deformylase -
AL014_11400 2277880..2278401 - 522 AOM16833 DNA-binding protein -
AL014_11405 2278404..2279246 - 843 AOM16834 maltose acetyltransferase -
AL014_11410 2279239..2279964 - 726 AOM16835 transcriptional regulator -
AL014_11415 2280140..2280436 + 297 AOM16836 hypothetical protein -
AL014_11420 2280605..2280961 - 357 AOM16837 hypothetical protein -
AL014_11425 2281004..2282596 + 1593 AOM16838 amino acid ABC transporter permease -
AL014_11430 2282609..2283349 + 741 AOM16839 ABC transporter -
AL014_11435 2283517..2284866 + 1350 AOM16840 D-alanine/D-serine/glycine permease -
AL014_11440 2284994..2285584 - 591 AOM16841 hypothetical protein -
AL014_11445 2285731..2287083 + 1353 AOM16842 branched-chain amino acid transporter II carrier protein -
AL014_11450 2287557..2288735 - 1179 AOM16843 transposase -
AL014_11455 2289165..2289539 - 375 AOM16844 hypothetical protein -
AL014_11460 2289656..2290138 - 483 AOM16845 protein tyrosine phosphatase -
AL014_11465 2290190..2290768 - 579 AOM16846 TetR family transcriptional regulator -
AL014_11470 2290797..2291798 - 1002 AOM16847 ATP-dependent DNA helicase RuvB -
AL014_11475 2291811..2292413 - 603 AOM16848 ATP-dependent DNA helicase RuvA -
AL014_11480 2292583..2293029 - 447 AOM16849 methionine sulfoxide reductase B -
AL014_11485 2293106..2293819 - 714 AOM16850 GntR family transcriptional regulator -
AL014_11490 2294042..2296030 + 1989 AOM16851 PTS maltose transporter subunit IIBC -
AL014_11495 2296115..2296675 - 561 AOM16852 septum formation protein Maf -
AL014_11500 2296697..2298805 - 2109 AOM16853 DNA mismatch repair protein MutL -
AL014_11505 2298823..2301468 - 2646 AOM16854 DNA mismatch repair protein MutS -
AL014_11510 2301452..2301826 - 375 AOM16855 hypothetical protein -
AL014_11515 2301843..2302640 - 798 AOM16856 metallophosphoesterase -
AL014_11520 2303048..2303821 - 774 AOM16857 HAD family hydrolase -
AL014_11525 2303841..2304476 - 636 AOM16858 6-O-methylguanine DNA methyltransferase -
AL014_11530 2304504..2305301 - 798 AOM16859 formate-nitrite transporter -
AL014_11535 2305617..2306228 + 612 AOM16860 30S ribosomal protein S4 -
AL014_11540 2306368..2306907 + 540 AOM16861 biotin synthase -
AL014_11545 2306982..2307491 - 510 AOM16862 hypothetical protein -
AL014_11550 2307871..2308632 - 762 AOM16863 3-ketoacyl-ACP reductase -
AL014_11555 2308629..2308850 - 222 AOM16864 hypothetical protein -
AL014_11560 2308869..2310389 - 1521 AOM16865 M protein trans-acting positive regulator -
AL014_11565 2310455..2311156 - 702 AOM16866 hypothetical protein -
AL014_11570 2311149..2311559 - 411 AOM16867 murein hydrolase transporter LrgA -
AL014_11575 2311886..2312620 + 735 AOM16868 glycerol uptake permease -
AL014_11580 2312773..2313726 + 954 AOM16869 integrase -
AL014_11585 2313780..2314736 - 957 AOM16870 hypothetical protein -
AL014_11590 2314861..2316039 - 1179 AOM16871 transposase -
AL014_11595 2316137..2316595 - 459 AOM16872 M protein trans-acting positive regulator -
AL014_11600 2316902..2317999 - 1098 AOM16873 cell surface protein -
AL014_11605 2318107..2320134 - 2028 AOM16874 lectin -
AL014_11610 2320279..2321007 - 729 AOM17636 cell surface protein -
AL014_11615 2321527..2322426 - 900 AOM16875 metallophosphoesterase -
AL014_11620 2322436..2322792 - 357 AOM16876 hypothetical protein -
AL014_11625 2323147..2323443 + 297 AOM16877 hypothetical protein -
AL014_11630 2324087..2325040 - 954 AOM16878 iron ABC transporter substrate-binding protein -
AL014_11635 2325063..2325818 - 756 AOM16879 iron ABC transporter ATP-binding protein -
AL014_11640 2325815..2326774 - 960 AOM16880 iron ABC transporter permease -
AL014_11645 2326767..2327717 - 951 AOM16881 iron ABC transporter permease -
AL014_11650 2327867..2328319 + 453 AOM16882 hypothetical protein -
AL014_11655 2328408..2330672 - 2265 AOM17637 bifunctional glutamate--cysteine ligase/glutathione synthetase -
AL014_11660 2330862..2331860 - 999 AOM16883 cell division protein FtsY -
AL014_11665 2331871..2332680 - 810 AOM16884 haloacid dehalogenase -
AL014_11670 2332689..2336270 - 3582 AOM16885 chromosome segregation protein SMC -
AL014_11675 2336290..2336976 - 687 AOM16886 ribonuclease III -
AL014_11680 2337324..2339105 - 1782 AOM16887 peptide ABC transporter substrate-binding protein -
AL014_11685 2339131..2340045 - 915 AOM16888 peptide ABC transporter permease -
AL014_11690 2340072..2341034 - 963 AOM16889 peptide ABC transporter permease -
AL014_11695 2341034..2341978 - 945 AOM16890 peptide ABC transporter substrate-binding protein -
AL014_11700 2341979..2342983 - 1005 AOM16891 peptide ABC transporter ATPase -
AL014_11705 2343364..2344659 + 1296 AOM16892 transposase -
AL014_11710 2344773..2345015 - 243 AOM16893 acyl carrier protein -
AL014_11715 2345137..2346138 - 1002 AOM16894 phosphate acyltransferase -
AL014_11720 2346187..2348223 - 2037 AOM16895 ATP-dependent DNA helicase -
AL014_11725 2348340..2350022 - 1683 AOM16896 hypothetical protein -
AL014_11730 2350074..2350436 - 363 AOM16897 hypothetical protein -
AL014_11735 2350706..2350894 + 189 AOM16898 50S ribosomal protein L28 -
AL014_11740 2351132..2353801 + 2670 AOM16899 copper ABC transporter permease -
AL014_11745 2354134..2354880 - 747 AOM16900 pseudouridine synthase -
AL014_11750 2355083..2355880 - 798 AOM16901 cobalt ABC transporter ATP-binding protein -
AL014_11755 2355870..2356739 - 870 AOM16902 cobalt ABC transporter -
AL014_11760 2356715..2357554 - 840 AOM16903 cobalt transporter ATP-binding subunit -
AL014_11765 2357826..2358206 - 381 AOM16904 50S ribosomal protein L17 -
AL014_11770 2358234..2359172 - 939 AOM16905 DNA-directed RNA polymerase subunit alpha -
AL014_11775 2359252..2359641 - 390 AOM16906 30S ribosomal protein S11 -
AL014_11780 2359669..2360034 - 366 AOM16907 30S ribosomal protein S13 -
AL014_11785 2360052..2360168 - 117 AOM16908 50S ribosomal protein L36 -
AL014_11790 2360201..2360419 - 219 AOM16909 translation initiation factor IF-1 -
AL014_11795 2360610..2361257 - 648 AOM16910 adenylate kinase -
AL014_11800 2361319..2362614 - 1296 AOM16911 preprotein translocase subunit SecY -
AL014_11805 2362614..2363054 - 441 AOM16912 50S ribosomal protein L15 -
AL014_11810 2363098..2363277 - 180 AOM16913 50S ribosomal protein L30 -
AL014_11815 2363292..2363792 - 501 AOM16914 30S ribosomal protein S5 -
AL014_11820 2363813..2364169 - 357 AOM16915 50S ribosomal protein L18 -
AL014_11825 2364330..2364866 - 537 AOM16916 50S ribosomal protein L6 -
AL014_11830 2364898..2365296 - 399 AOM16917 30S ribosomal protein S8 -
AL014_11835 2365332..2365517 - 186 AOM16918 30S ribosomal protein S14 -
AL014_11840 2365536..2366075 - 540 AOM16919 50S ribosomal protein L5 -
AL014_11845 2366103..2366411 - 309 AOM16920 50S ribosomal protein L24 -
AL014_11850 2366448..2366816 - 369 AOM16921 50S ribosomal protein L14 -
AL014_11855 2366874..2367140 - 267 AOM16922 30S ribosomal protein S17 -
AL014_11860 2367165..2367353 - 189 AOM16923 50S ribosomal protein L29 -
AL014_11865 2367343..2367777 - 435 AOM16924 50S ribosomal protein L16 -
AL014_11870 2367780..2368436 - 657 AOM16925 30S ribosomal protein S3 -
AL014_11875 2368450..2368797 - 348 AOM16926 50S ribosomal protein L22 -
AL014_11880 2368820..2369098 - 279 AOM16927 30S ribosomal protein S19 -
AL014_11885 2369141..2369974 - 834 AOM16928 50S ribosomal protein L2 -
AL014_11890 2370013..2370303 - 291 AOM16929 50S ribosomal protein L23 -
AL014_11895 2370303..2370926 - 624 AOM16930 50S ribosomal protein L4 -
AL014_11900 2370954..2371583 - 630 AOM16931 50S ribosomal protein L3 -
AL014_11905 2371614..2371922 - 309 AOM16932 30S ribosomal protein S10 -
AL014_11910 2372329..2373516 - 1188 AOM16933 elongation factor Tu -
AL014_11915 2373688..2375775 - 2088 AOM16934 elongation factor G -
AL014_11920 2375869..2376339 - 471 AOM16935 30S ribosomal protein S7 -
AL014_11925 2376423..2376836 - 414 AOM16936 30S ribosomal protein S12 -
AL014_11930 2377155..2377838 + 684 AOM16937 ribose 5-phosphate isomerase -
AL014_11935 2377971..2378552 + 582 AOM16938 resolvase -
AL014_11940 2378724..2379410 + 687 AOM16939 phosphoglyceromutase -
AL014_11945 2379708..2380415 - 708 AOM16940 purine nucleoside phosphorylase -
AL014_11950 2380432..2381250 - 819 AOM16941 purine nucleoside phosphorylase -
AL014_11955 2381274..2382440 - 1167 AOM16942 phosphopentomutase -
AL014_11960 2382539..2383495 - 957 AOM16943 sugar ABC transporter permease -
AL014_11965 2383495..2384628 - 1134 AOM16944 branched-chain amino acid ABC transporter permease -
AL014_11970 2384621..2386183 - 1563 AOM16945 heme ABC transporter ATP-binding protein -
AL014_11975 2386395..2387477 - 1083 AOM16946 hypothetical protein -
AL014_11980 2387543..2387941 - 399 AOM16947 cytidine deaminase -
AL014_11985 2387962..2388624 - 663 AOM16948 deoxyribose-phosphate aldolase -
AL014_11990 2388670..2389971 - 1302 AOM16949 thymidine phosphorylase -
AL014_11995 2390112..2391128 - 1017 AOM16950 LacI family transcriptional regulator -
AL014_12000 2391436..2392041 - 606 AOM16951 methyltransferase -
AL014_12005 2392237..2393160 + 924 AOM16952 pantothenate kinase -
AL014_12010 2393219..2394784 + 1566 AOM16953 GMP synthase -
AL014_12015 2394852..2396045 - 1194 AOM16954 integrase -
AL014_12020 2396072..2396272 - 201 AOM16955 conjugal transfer protein -
AL014_12025 2396770..2397000 - 231 AOM16956 hypothetical protein -
AL014_12030 2396997..2397419 - 423 AOM16957 DNA-binding protein -
AL014_12035 2397950..2398303 + 354 AOM16958 DNA-binding protein -
AL014_12045 2400049..2400546 + 498 AOM16959 dihydrofolate reductase -
AL014_12050 2400618..2402570 - 1953 AOM16960 insertion element protein -
AL014_12055 2402577..2402873 - 297 AOM16961 hypothetical protein -
AL014_12065 2404045..2405340 + 1296 AOM16962 transposase -
AL014_12070 2405750..2406679 - 930 AOM16963 conjugal transfer protein -
AL014_12075 2406696..2407718 - 1023 AOM16964 peptidase P60 -
AL014_12080 2407715..2409742 - 2028 AOM16965 hypothetical protein -
AL014_12085 2409739..2412192 - 2454 AOM16966 ATP/GTP-binding protein -
AL014_12090 2412176..2412571 - 396 AOM16967 hypothetical protein -
AL014_12095 2412643..2413281 - 639 AOM16968 hypothetical protein -
AL014_12100 2413337..2413837 - 501 AOM16969 antirestriction protein ArdA -
AL014_12105 2413898..2414677 - 780 AOM16970 hypothetical protein -
AL014_12110 2414719..2414940 - 222 AOM16971 conjugal transfer protein -
AL014_12115 2414937..2415227 - 291 AOM16972 hypothetical protein -
AL014_12120 2415224..2416408 - 1185 AOM16973 Cro/Cl family transcriptional regulator -
AL014_12125 2416590..2418011 - 1422 AOM16974 cell division protein FtsK -
AL014_12130 2418015..2418788 - 774 AOM17638 hypothetical protein -
AL014_12135 2418798..2419175 - 378 AOM16975 conjugal transfer protein -
AL014_12140 2419196..2419510 - 315 AOM16976 conjugal transfer protein -
AL014_12145 2419710..2421503 - 1794 AOM16977 AAA family ATPase -
AL014_12150 2421500..2423689 - 2190 AOM16978 ATP-dependent endonuclease -
AL014_12155 2423823..2425013 - 1191 AOM16979 transposase -
AL014_12160 2425885..2427516 - 1632 AOM16980 beta-1,4-galactanase -
AL014_12165 2427530..2429203 - 1674 AOM16981 PTS lactose transporter subunit IIBC -
AL014_12170 2429216..2429533 - 318 AOM16982 PTS lactose transporter subunit IIA -
AL014_12175 2429558..2430958 - 1401 AOM16983 6-phospho-beta-galactosidase -
AL014_12180 2431195..2431980 + 786 AOM16984 DeoR faimly transcriptional regulator -
AL014_12185 2431983..2432675 + 693 AOM16985 pesticidal protein Cry10Aa -
AL014_12190 2432949..2433320 - 372 AOM16986 Cro/Cl family transcriptional regulator -
AL014_12195 2433720..2433950 - 231 AOM16987 hypothetical protein -
AL014_12200 2434044..2434382 - 339 AOM17639 hypothetical protein -
AL014_12205 2435902..2436780 - 879 AOM16988 hypothetical protein -
AL014_12210 2437127..2438152 - 1026 AOM16989 hypothetical protein -
AL014_12215 2438511..2439014 + 504 AOM16990 protein vanZ -
AL014_12220 2439827..2439964 - 138 AOM16991 hypothetical protein -
AL014_12225 2440059..2440637 - 579 AOM16992 hypothetical protein -
AL014_12230 2440806..2441003 + 198 AOM16993 hypothetical protein -
AL014_12235 2441106..2441924 - 819 AOM16994 dihydroorotate dehydrogenase -
AL014_12240 2442089..2443819 + 1731 AOM16995 pyruvate oxidase -
AL014_12245 2444005..2444526 - 522 AOM17640 hypothetical protein -
AL014_12250 2444775..2446397 + 1623 AOM16996 ABC transporter ATP-binding protein -
AL014_12255 2446526..2447389 - 864 AOM16997 fatty acid-binding protein DegV -
AL014_12260 2448138..2449433 + 1296 AOM16998 transposase -
AL014_12265 2449636..2450928 - 1293 AOM16999 adenylosuccinate synthetase -
AL014_12270 2451708..2453075 - 1368 AOM17000 DNA helicase -
AL014_12275 2453349..2453801 - 453 AOM17001 50S ribosomal protein L9 -
AL014_12280 2453807..2455780 - 1974 AOM17002 phosphoesterase -
AL014_12285 2455923..2456159 - 237 AOM17003 30S ribosomal protein S18 -
AL014_12290 2456185..2456697 - 513 AOM17004 single-stranded DNA-binding protein -
AL014_12295 2456747..2457046 - 300 AOM17005 30S ribosomal protein S6 -
AL014_12300 2457282..2459753 - 2472 AOM17006 DNA gyrase subunit A -
AL014_12305 2459773..2461719 - 1947 AOM17007 DNA gyrase subunit B -
AL014_12310 2461716..2462840 - 1125 AOM17008 recombinase RecF -
AL014_12315 2462827..2463069 - 243 AOM17009 RNA-binding protein -
AL014_12320 2463298..2464428 - 1131 AOM17010 DNA polymerase III subunit beta -
AL014_12325 2464626..2465960 - 1335 AOM17011 chromosomal replication initiator protein DnaA -
AL014_12330 2466483..2466617 + 135 AOM17012 50S ribosomal protein L34 -
AL014_12335 2466735..2467091 + 357 AOM17013 ribonuclease P -
AL014_12340 2467088..2467906 + 819 AOM17014 hypothetical protein -
AL014_12345 2467924..2468682 + 759 AOM17015 RNA-binding protein -
AL014_12350 2468850..2469188 - 339 AOM17016 hypothetical protein -
AL014_12355 2469532..2470929 + 1398 AOM17017 tRNA modification GTPase -
AL014_12360 2470946..2472847 + 1902 AOM17018 tRNA uridine 5-carboxymethylaminomethyl modification protein -
AL014_12365 2473079..2473792 + 714 AOM17641 16S rRNA methyltransferase -
AL014_12370 2473804..2474571 + 768 AOM17019 sporulation initiation inhibitor Soj -
AL014_12375 2474558..2475448 + 891 AOM17020 chromosome partitioning protein ParB -
AL014_12380 2475469..2475660 + 192 AOM17021 hypothetical protein -
AL014_12385 2475669..2476769 + 1101 AOM17022 GTP-binding protein -
AL014_12390 2476859..2477554 + 696 AOM17023 hypothetical protein -
AL014_12395 2478059..2479543 + 1485 AOM17024 inosine-5-monophosphate dehydrogenase -
AL014_12400 2480092..2481363 - 1272 AOM17025 serine--tRNA ligase -
AL014_12405 2481657..2482865 - 1209 AOM17026 histidine kinase -
AL014_12410 2482852..2483541 - 690 AOM17027 PhoB family transcriptional regulator -
AL014_12415 2483962..2484171 - 210 AOM17028 hypothetical protein -
AL014_12480 2490282..2490749 + 468 AOM17029 CtsR family transcriptional regulator -
AL014_12485 2490756..2493248 + 2493 AOM17030 Clp protease ClpX -
AL014_12490 2493469..2494392 + 924 AOM17031 peptidase U32 -
AL014_12495 2494410..2495651 + 1242 AOM17642 protease -
AL014_12500 2495785..2497131 + 1347 AOM17032 glutathione reductase -
AL014_12505 2498066..2499019 - 954 AOM17033 1,4-dihydroxy-2-naphthoate prenyltransferase -
AL014_12510 2499032..2500135 - 1104 AOM17034 thiamine biosynthesis protein ApbE -
AL014_12515 2500225..2501160 - 936 AOM17035 FMN-binding protein -
AL014_12520 2501462..2503396 + 1935 AOM17036 NADH dehydrogenase -
AL014_12525 2503853..2504269 + 417 AOM17037 hypothetical protein -
AL014_12530 2504283..2504849 + 567 AOM17038 heptaprenyl diphosphate synthase -
AL014_12535 2504872..2505858 + 987 AOM17039 geranylgeranyl pyrophosphate synthase -
AL014_12540 2506013..2507995 - 1983 AOM17040 cell surface protein -
AL014_12545 2508282..2508806 + 525 AOM17041 hypothetical protein -
AL014_12550 2509123..2510091 - 969 AOM17042 biotin--acetyl-CoA-carboxylase ligase -
AL014_12555 2510248..2511054 - 807 AOM17043 ABC transporter ATP-binding protein -
AL014_12560 2511051..2511956 - 906 AOM17044 ABC transporter permease -
AL014_12565 2511974..2512942 - 969 AOM17045 ABC transporter substrate-binding protein -
AL014_12570 2513661..2517287 + 3627 AOM17046 DNA-directed RNA polymerase subunit beta -
AL014_12575 2517366..2521019 + 3654 AOM17047 DNA-directed RNA polymerase subunit beta' -
AL014_12580 2521614..2522639 - 1026 AOM17048 LacI family transcriptional regulator -
AL014_12585 2522914..2524599 + 1686 AOM17049 sugar phosphorylase -
AL014_12590 2524613..2525896 + 1284 AOM17050 sugar ABC transporter substrate-binding protein -
AL014_12595 2525966..2526835 + 870 AOM17051 sugar ABC transporter permease -
AL014_12600 2526832..2527668 + 837 AOM17052 sugar ABC transporter permease -
AL014_12605 2527694..2528761 + 1068 AOM17053 alcohol dehydrogenase -
AL014_12610 2528758..2529585 + 828 AOM17054 hypothetical protein -
AL014_12615 2529630..2530655 + 1026 AOM17055 oxidoreductase -
AL014_12620 2530652..2532835 + 2184 AOM17056 glycosyl hydrolase family 65 -
AL014_12625 2532835..2533965 + 1131 AOM17057 glycerate kinase -
AL014_12630 2533962..2534639 + 678 AOM17058 beta-phosphoglucomutase -
AL014_12635 2534723..2535250 + 528 AOM17059 methionine sulfoxide reductase A -
AL014_12640 2535451..2536137 - 687 AOM17060 peptidase A24 -
AL014_12645 2536217..2537755 + 1539 AOM17061 gluconate kinase -
AL014_12650 2537875..2538342 + 468 AOM17062 ferritin -
AL014_12655 2538861..2539304 + 444 AOM17063 50S ribosomal protein L13 -
AL014_12660 2539320..2539712 + 393 AOM17064 30S ribosomal protein S9 -
AL014_12665 2539805..2541025 - 1221 AOM17065 integrase -
AL014_12670 2541943..2542683 + 741 AOM17066 manganese ABC transporter ATP-binding protein -
AL014_12675 2542775..2543962 - 1188 AOM17067 transposase -
AL014_12680 2544284..2545126 + 843 AOM17068 manganese ABC transporter substrate-binding protein -
AL014_12685 2545123..2546073 + 951 AOM17069 manganese ABC transporter substrate-binding protein -
AL014_12690 2546088..2546321 + 234 AOM17070 iron-dependent repressor -
AL014_12695 2546718..2547236 + 519 AOM17071 TetR family transcriptional regulator -
AL014_12700 2547367..2548035 + 669 AOM17072 cobalt transporter -
AL014_12705 2548046..2549461 + 1416 AOM17073 ABC transporter ATP-binding protein -
AL014_12710 2549479..2550048 + 570 AOM17074 hypothetical protein -
AL014_12715 2550158..2551912 + 1755 AOM17075 ABC transporter ATP-binding protein -
AL014_12720 2551866..2553638 + 1773 AOM17076 ABC transporter ATP-binding protein -
AL014_12725 2554161..2554430 + 270 AOM17077 30S ribosomal protein S14 -
AL014_12730 2554445..2554624 + 180 AOM17078 50S ribosomal protein L32 -
AL014_12735 2554656..2555033 + 378 AOM17079 hypothetical protein -
AL014_12740 2555054..2555203 + 150 AOM17080 50S ribosomal protein L33 -
AL014_12745 2555227..2556210 + 984 AOM17081 cobalamin biosynthesis protein CobW -
AL014_12750 2556240..2556362 + 123 AOM17082 hypothetical protein -
AL014_12755 2556380..2557903 + 1524 AOM17083 zinc-binding protein -
AL014_12760 2557927..2558166 + 240 AOM17084 hypothetical protein -
AL014_12765 2558359..2558820 - 462 AOM17085 transposase -
AL014_12770 2559015..2559233 - 219 AOM17086 transposase -
AL014_12775 2559351..2560967 + 1617 AOM17087 cobalamin biosynthesis protein -
AL014_12780 2561208..2562335 - 1128 AOM17643 transposase -
AL014_12790 2563275..2563607 - 333 AOM17088 transposase -
AL014_12795 2564121..2564312 - 192 AOM17089 hypothetical protein -
AL014_12800 2564406..2564792 - 387 AOM17090 hypothetical protein -
AL014_12805 2565486..2566691 + 1206 AOM17091 AraC family transcriptional regulator -
AL014_12810 2566708..2567142 + 435 AOM17092 hypothetical protein -
AL014_12815 2567587..2568792 + 1206 AOM17644 transposase -
AL014_12820 2568728..2568970 + 243 AOM17093 hypothetical protein -
AL014_12835 2575860..2576576 + 717 AOM17645 transporter -
AL014_12840 2576710..2578053 + 1344 AOM17094 pyridine nucleotide-disulfide oxidoreductase -
AL014_12845 2578165..2579616 + 1452 AOM17095 N-acetylmuramoyl-L-alanine amidase cd419a
AL014_12850 2579965..2580597 + 633 AOM17096 hypothetical protein -
AL014_12855 2581185..2582624 + 1440 AOM17097 multidrug MFS transporter -
AL014_12860 2583386..2583601 + 216 AOM17098 hypothetical protein -
AL014_12865 2583913..2584074 - 162 AOM17099 transposase -
AL014_12870 2584261..2585172 - 912 AOM17100 conjugal transfer protein orf13
AL014_12875 2585191..2586195 - 1005 AOM17101 peptidase P60 orf14
AL014_12880 2586192..2588315 - 2124 AOM17102 conjugal transfer protein orf15
AL014_12885 2588320..2590767 - 2448 AOM17103 ATP/GTP-binding protein virb4
AL014_12890 2590754..2591143 - 390 AOM17104 hypothetical protein orf17a
AL014_12895 2591203..2591706 - 504 AOM17105 antirestriction protein ArdA -
AL014_12900 2591719..2591943 - 225 AOM17106 conjugal transfer protein orf19
AL014_12905 2592047..2593957 - 1911 AOM17107 reverse transcriptase -
AL014_12910 2594703..2594822 - 120 AOM17108 hypothetical protein -
AL014_12915 2594837..2596021 - 1185 AOM17109 Cro/Cl family transcriptional regulator -
AL014_12920 2596280..2596570 - 291 AOM17110 hypothetical protein -
AL014_12925 2596560..2597267 - 708 AOM17111 DNA methylase -
AL014_12930 2597268..2597702 - 435 AOM17112 DNA methyltransferase -
AL014_12935 2597935..2598501 - 567 AOM17113 zeta toxin family protein -
AL014_12940 2598686..2600026 - 1341 AOM17114 cell division protein FtsK virb4
AL014_12945 2600109..2600444 - 336 AOM17115 damage-inducible protein J -
AL014_12950 2600454..2600828 - 375 AOM17116 conjugal transfer protein orf23
AL014_12955 2600841..2601155 - 315 AOM17117 conjugal transfer protein orf23
AL014_12960 2601268..2604495 - 3228 AOM17118 cell surface protein -
AL014_12965 2604912..2606078 - 1167 AOM17119 recombinase -


Host bacterium


ID   270 Element type   ICE (Integrative and conjugative element)
Element name   ICE_EfmISMMSVRE1_rpsI GenBank   CP012430
Element size   3130373 bp Coordinate of oriT [Strand]   56381..56423 [+]
Host bacterium   Enterococcus faecium strain ISMMS_VRE_1 Coordinate of element   2539659..2604823

Cargo genes


Drug resistance gene   tet(M)
Virulence gene   psaA, fss3
Metal resistance gene   -
Degradation gene   -
Symbiosis gene   -
Anti-CRISPR   AcrIIA9, AcrIIA14