Detailed information of oriT

oriT

The information of the oriT region

• oriTDB ID: 122485
• Name: oriT_S4|unnamed2
• Organism: Acinetobacter oleivorans strain S4
• Sequence Completeness: -
• NCBI accession of oriT (coordinates [strand]): NZ_CP110256 (7753..7776 [-], 24 nt)
• oriT length: 24 nt
• IRs (inverted repeats): 1..7, 11..17 (GTTTCTC..GAGAAAC)
• Location of nic site: _
• Conserved sequence flanking the nic site: _
• Note: Predicted by oriTfinder 2.0

oriT sequence

• Length: 24 nt

>oriT_S4|unnamed2
GTTTCTCGAAGAGAAACGCGGAAG

oriT secondary structure

Predicted by RNAfold.

Relaxase

MobA_MobL_OKW95_RS19940_S4|unnamed2

• ID: 14177
• GenBank: WP_323740301
• Name: MobA_MobL_OKW95_RS19940_S4|unnamed2
• UniProt ID: _
• Length: 958 a.a.
• Note: Predicted by oriTfinder 2.0

Relaxase protein sequence

• Length: 958 a.a.
• Molecular weight: 109419.14 Da
• Isoelectric Point: 7.7721

>WP_323740301.1 AAA family ATPase [Acinetobacter oleivorans]
MANYHLSVKTGKNVGSSGSRGASHYAYINREGKYKRDDIEQIESGNLPSWAVDAQHFWKAADKYERANGR
VYTELEISLPRELNPEQRQELVQQFVEKTLGKNFTYSYAIHTPLASDGEQNPHVHLMFCERKLDGSDRTE
QQFFRRYNPKNPELGGAGKDRYFSARIFVSDVRMEWANHANDYMEKLGLDARIDHRSYQAIGTEIQSQNF
RADYVSHDQYSINENIKNIKHQNGETIIEKPSEVLKVLTATQSVFTMRELDRFLVNHTDGEEQYLKAREA
VLTCPEMAVLYGKDSVVLSSNELVGIEESISALIYNANQDSRIQKPRTLIDKLPLNAVRVAETRTFNPEQ
EKAFYTLTSTDRISLLNGSAGTGKSYVLSAVSEAYKDSDYQVYGIALQAITAKAIASDCDIPSSTIASFL
ARYESGNLAINDKTVLILDEAGMVGSRDMQKLLMITEQHNAQLKLVGDSYQLNAVMAGSAFNHIQKNLDH
KNIATLENIQRQKTTEMRKASEYLSKHEVDKALDIYQVLGKVKACESHEVALAKTIYSWSLDHSESKLIL
AHSNRDVDELNRMARSVLIKQGKLPAESQKVNTYKGEIDLATGDKIVFKQNNHALNISNGETARIIGFER
NAQQQIKGLMVESDRGGQIKKIDLDSYQHFKHGYANTIHSSQGMTVENAYILASENMNANLTYVALTRHK
GNVELNYSATRFNQEEKIWVRKPDGQYQEKELSAFDNLKRILGRTEVKNFSTDYSVVQAKDELIKNYLQE
HRHSISEKREIYNLNSTFKAMTMPDQHFSKQEIIEEVRNSLRSKAILGDEIVKFNGQMNIAKGEQLQLDQ
ELILKTGLFKKEHFEKDTSLQVVDAYRVKDEPIMKARIKGEIYEIPFNKLHIRYSDKYLTEFRHDTSARF
DKRFKSELHSKFNQELQQQRQNQPTQNLNAPNSELKNAPRMKNGPRMS

Protein domains

Predicted by InterproScan.

• MobA/MobL family (MobA_MobL) (43-208)

• AAA domain (AAA_30) (346-535)

• Viral (Superfamily 1) RNA helicase (Viral_helicase1) (661-703)

Protein structure

No available structure.

Host bacterium

• ID: 22911
• GenBank: NZ_CP110256
• Plasmid name: S4|unnamed2
• Incompatibility group: -
• Plasmid size: 10622 bp
• Coordinate of oriT [Strand]: 7753..7776 [-]
• Host baterium: Acinetobacter oleivorans strain S4

Cargo genes

• Drug resistance gene: -
• Virulence gene: -
• Metal resistance gene: -
• Degradation gene: -
• Symbiosis gene: -
• Anti-CRISPR: AcrIF11