Detailed information of oriT

oriT

The information of the oriT region


oriTDB ID   122379
Name   oriT1_ES-1390|unnamed4 in_silico
Organism   Enterococcus faecalis strain ES-1390
Sequence Completeness      -
NCBI accession of oriT (coordinates [strand])   NZ_CP136357 (266..315 [+], 50 nt)
oriT length   50 nt
IRs (inverted repeats)     _
Location of nic site      _
Conserved sequence flanking the
  nic site    		  _
Note   Predicted by oriTfinder 2.0

  oriT sequence  


Download         Length: 50 nt

>oriT1_ES-1390|unnamed4
AATATCGCAACATGGTACCATGTTGCTCTGCTCGCAAAAAGAAAGCCTAC

Visualization of oriT structure

  oriT secondary structure

Predicted by RNAfold.

Download structure file


Relaxase

ID   14116 GenBank   WP_104659816
Name   mobV_RX141_RS14445_ES-1390|unnamed4 insolico UniProt ID   _
Length   559 a.a. PDB ID   
Note   Predicted by oriTfinder 2.0

  Relaxase protein sequence


Download         Length: 559 a.a.        Molecular weight: 65161.76 Da        Isoelectric Point: 8.8215

>WP_104659816.1 MobV family relaxase [Enterococcus faecalis]
MSKIVARMEKMKVGNLSGIQRHNQRETDNHSNPDIDIEKSHLNYDLVNPGSINYREKIKQIIESQRISKR
AVRKDAVLVNEWIITSDTAFFQENTDTQAFFTDVVAYFSDRCGRQNVAYATVHLDETTPHMHLGIVPMYE
GRLSSKQVFSRQSLLEIQEELPNYLKERGYAIERGLRGSPQKHLSVKEYKDVQKEIQVSKQELANQEQIL
VEKERELHSYEQAIFRIDRLLEEKNEEVKGKVQAMNQLETKRNEIINSLQTTVLPDLANIKEKKFSFNGL
KYVLSASDLSAIKSITKDFETLRTQNKHLKIENNTLAQKNKELTQVNHEQELQITDLAYELTLKKEQLTA
FEEKQLNYDQSEQIKQELDRTTQKVSVLETENKRLKDKITDLTYDFSELNEKYQEIKLKFDGLTTYLHER
LGQAKETILFTIQQGVKYLQNAPKLKKSLERYSKDRTYLIDEKGTLFLPPDTGSKGVTMSLNPHFYPLKA
PFYNRETGCYEFVGEYMANGRSRTNTLQLSEEQVLEKKAFTFEQSTDKKAWQQSKKYSRDMSKGRGLSR

  Protein domains


Predicted by InterproScan.

Plasmid recombination enzyme (Mob_Pre)

(2-191)


  Protein structure



No available structure.




Host bacterium

ID   22805 GenBank   NZ_CP136357
Plasmid name   ES-1390|unnamed4 Incompatibility group   -
Plasmid size   5164 bp Coordinate of oriT [Strand]   266..315 [+]; 4852..4886 [-]
Host baterium   Enterococcus faecalis strain ES-1390

Cargo genes

Drug resistance gene   -
Virulence gene   -
Metal resistance gene   -
Degradation gene   -
Symbiosis gene   -
Anti-CRISPR   -