Detailed information of oriT

oriT

The information of the oriT region


oriTDB ID   122277
Name   oriT_PmBR607|unnamed1 in_silico
Organism   Proteus mirabilis strain PmBR607
Sequence Completeness      -
NCBI accession of oriT (coordinates [strand])   NZ_CP049754 (411..455 [+], 45 nt)
oriT length   45 nt
IRs (inverted repeats)      7..13, 25..31  (CGTTTCT..AGAAACG)
Location of nic site      _
Conserved sequence flanking the
  nic site    		  _
Note   Predicted by oriTfinder 2.0

  oriT sequence  


Download         Length: 45 nt

>oriT_PmBR607|unnamed1
GCGCACCGTTTCTAAACAAAGTGAAGAAACGTCTAAGTGCGCCCT

Visualization of oriT structure

  oriT secondary structure

Predicted by RNAfold.

Download structure file


Relaxase

ID   14051 GenBank   WP_152118482
Name   MobA_MobL_G9C79_RS18695_PmBR607|unnamed1 insolico UniProt ID   _
Length   369 a.a. PDB ID   
Note   Predicted by oriTfinder 2.0

  Relaxase protein sequence


Download         Length: 369 a.a.        Molecular weight: 42936.64 Da        Isoelectric Point: 6.7426

>WP_152118482.1 MULTISPECIES: MobA/MobL family protein [Enterobacterales]
MASYHLSVKTGGKGKAASHADYIAREGKYAREKDNDLEHQESGNMPAWAAHKPSEFWKATDTFERANGCT
YREIEIALPRELTPAQRLELVRDFVQQEIGDRHAYQFAIHNPRAAIEGGEQPHAHIMFSERLNDGIERDP
QLYFKRANTKNPERGGAKKARFGETPTERKAYLIAQRERWADLQNKHLERYQHPDRVDARSLKAQGIERE
PERHFGAGQVRQFNTAQLHALMERREAERQAQHCREECNSVIDVTTTLREALAERDNVTETPKCEVMQNA
TQGRTFDFEKESDKLNALVSDAMKDIQEEIDLQSLVNDAMAEFQGIHQDRVKQQEREYWAEQRRQQEKER
QRLAELKRQKPDDGWSFSR

  Protein domains


Predicted by InterproScan.

MobA/MobL family (MobA_MobL)

(42-218)


  Protein structure



No available structure.




Host bacterium

ID   22704 GenBank   NZ_CP049754
Plasmid name   PmBR607|unnamed1 Incompatibility group   ColE10
Plasmid size   8937 bp Coordinate of oriT [Strand]   411..455 [+]
Host baterium   Proteus mirabilis strain PmBR607

Cargo genes

Drug resistance gene   -
Virulence gene   -
Metal resistance gene   -
Degradation gene   -
Symbiosis gene   -
Anti-CRISPR   -