Detailed information of oriT
oriT
The information of the oriT region
oriTDB ID | 122277 |
Name | oriT_PmBR607|unnamed1 |
Organism | Proteus mirabilis strain PmBR607 |
Sequence Completeness | - |
NCBI accession of oriT (coordinates [strand]) | NZ_CP049754 (411..455 [+], 45 nt) |
oriT length | 45 nt |
IRs (inverted repeats) | 7..13, 25..31 (CGTTTCT..AGAAACG) |
Location of nic site | _ |
Conserved sequence flanking the nic site |
_ |
Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 45 nt
>oriT_PmBR607|unnamed1
GCGCACCGTTTCTAAACAAAGTGAAGAAACGTCTAAGTGCGCCCT
GCGCACCGTTTCTAAACAAAGTGAAGAAACGTCTAAGTGCGCCCT
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure fileRelaxase
ID | 14051 | GenBank | WP_152118482 |
Name | MobA_MobL_G9C79_RS18695_PmBR607|unnamed1 | UniProt ID | _ |
Length | 369 a.a. | PDB ID | |
Note | Predicted by oriTfinder 2.0 |
Relaxase protein sequence
Download Length: 369 a.a. Molecular weight: 42936.64 Da Isoelectric Point: 6.7426
>WP_152118482.1 MULTISPECIES: MobA/MobL family protein [Enterobacterales]
MASYHLSVKTGGKGKAASHADYIAREGKYAREKDNDLEHQESGNMPAWAAHKPSEFWKATDTFERANGCT
YREIEIALPRELTPAQRLELVRDFVQQEIGDRHAYQFAIHNPRAAIEGGEQPHAHIMFSERLNDGIERDP
QLYFKRANTKNPERGGAKKARFGETPTERKAYLIAQRERWADLQNKHLERYQHPDRVDARSLKAQGIERE
PERHFGAGQVRQFNTAQLHALMERREAERQAQHCREECNSVIDVTTTLREALAERDNVTETPKCEVMQNA
TQGRTFDFEKESDKLNALVSDAMKDIQEEIDLQSLVNDAMAEFQGIHQDRVKQQEREYWAEQRRQQEKER
QRLAELKRQKPDDGWSFSR
MASYHLSVKTGGKGKAASHADYIAREGKYAREKDNDLEHQESGNMPAWAAHKPSEFWKATDTFERANGCT
YREIEIALPRELTPAQRLELVRDFVQQEIGDRHAYQFAIHNPRAAIEGGEQPHAHIMFSERLNDGIERDP
QLYFKRANTKNPERGGAKKARFGETPTERKAYLIAQRERWADLQNKHLERYQHPDRVDARSLKAQGIERE
PERHFGAGQVRQFNTAQLHALMERREAERQAQHCREECNSVIDVTTTLREALAERDNVTETPKCEVMQNA
TQGRTFDFEKESDKLNALVSDAMKDIQEEIDLQSLVNDAMAEFQGIHQDRVKQQEREYWAEQRRQQEKER
QRLAELKRQKPDDGWSFSR
Protein domains
Predicted by InterproScan.
Protein structure
No available structure.
Host bacterium
ID | 22704 | GenBank | NZ_CP049754 |
Plasmid name | PmBR607|unnamed1 | Incompatibility group | ColE10 |
Plasmid size | 8937 bp | Coordinate of oriT [Strand] | 411..455 [+] |
Host baterium | Proteus mirabilis strain PmBR607 |
Cargo genes
Drug resistance gene | - |
Virulence gene | - |
Metal resistance gene | - |
Degradation gene | - |
Symbiosis gene | - |
Anti-CRISPR | - |