Detailed information of oriT

oriT

The information of the oriT region

• oriTDB ID: 122027
• Name: oriT_pCUVET19-891.5
• Organism: Enterobacter hormaechei strain CUVET19-891
• Sequence Completeness: -
• NCBI accession of oriT (coordinates [strand]): NZ_CP114990 (1218..1251 [-], 34 nt)
• oriT length: 34 nt
• IRs (inverted repeats): _
• Location of nic site: _
• Conserved sequence flanking the nic site: _
• Note: Predicted by oriTfinder 2.0

oriT sequence

• Length: 34 nt

>oriT_pCUVET19-891.5
ACGATTTTGCGAAGCAAAGTCTAGTGAGTACACT

oriT secondary structure

Predicted by RNAfold.

Relaxase

mobV_O8I28_RS24995_pCUVET19-891.5

• ID: 13900
• GenBank: WP_077820565
• Name: mobV_O8I28_RS24995_pCUVET19-891.5
• UniProt ID: _
• Length: 338 a.a.
• Note: Predicted by oriTfinder 2.0

Relaxase protein sequence

• Length: 338 a.a.
• Molecular weight: 38583.34 Da
• Isoelectric Point: 9.7859

>WP_077820565.1 MULTISPECIES: MobV family relaxase [Enterobacteriaceae]
MRSPDWLDVRQNEGVSMANYAIMRCKKLTGMGSVASALQHCYRERETPNADAERTPENHCSVSQSADEAM
GKLRELLPEKRRKDAVLCVEYVMTASPEWWDKATPRQQAEFFARSEQWLENKYGKDRVVAAVVHRDEATP
HLSAFVVPLTQDGRLSAKEFIGGRSKMRDDQSTYAESVKKLGLERGIEGSRATHQTVQHYYESINRGTRS
QVSISPEALEPRVLRKGIFTKDVEDQAAIAKRLSQAVNDGFAGTIAMASQSAQNAKRARDLQKTMDSQQK
RLQSVTEPFKGLSREQMTHILTMAQTFQQQNHDREKQRQLEREQERQQRQKTDRGISR

Protein domains

Predicted by InterproScan.

• Plasmid recombination enzyme (Mob_Pre) (17-201)

Protein structure

No available structure.

Host bacterium

• ID: 22454
• GenBank: NZ_CP114990
• Plasmid name: pCUVET19-891.5
• Incompatibility group: -
• Plasmid size: 3338 bp
• Coordinate of oriT [Strand]: 1218..1251 [-]
• Host baterium: Enterobacter hormaechei strain CUVET19-891

Cargo genes

• Drug resistance gene: -
• Virulence gene: -
• Metal resistance gene: -
• Degradation gene: -
• Symbiosis gene: -
• Anti-CRISPR: -