Detailed information of oriT

oriT

The information of the oriT region

• oriTDB ID: 121505
• Name: oriT_pWP5-S18-CRE-02_6
• Organism: Enterobacter cloacae strain WP5-S18-CRE-02
• Sequence Completeness: -
• NCBI accession of oriT (coordinates [strand]): NZ_AP022132 (33..66 [+], 34 nt)
• oriT length: 34 nt
• IRs (inverted repeats): _
• Location of nic site: _
• Conserved sequence flanking the nic site: _
• Note: Predicted by oriTfinder 2.0

oriT sequence

• Length: 34 nt

>oriT_pWP5-S18-CRE-02_6
ACGATTTTGCGAAGCAAAGTCTAGTGAGTACACT

oriT secondary structure

Predicted by RNAfold.

Relaxase

mobV_H7R61_RS27340_pWP5-S18-CRE-02_6

• ID: 13560
• GenBank: WP_232101167
• Name: mobV_H7R61_RS27340_pWP5-S18-CRE-02_6
• UniProt ID: _
• Length: 322 a.a.
• Note: Predicted by oriTfinder 2.0

Relaxase protein sequence

• Length: 322 a.a.
• Molecular weight: 36601.32 Da
• Isoelectric Point: 10.0024

>WP_232101167.1 MobV family relaxase [Enterobacter cloacae]
MANYAIMRCKKLTGMGSVASALQHCYRERETPNADADRTPENHCSVSQSADEAMGKLRELLPEKRRKDAV
LAVEYVMTASPEWWNEATPRQQAEFFARSEQWLENKYGKDRVVAAVVHRDEATPHLSAFVVPLTQDGRLS
AKEFIGGRSKMRDDQSTYAESVKKLGLERGIEGSRATHQTVQHYYESINRGTRSQVSISPEALEPRVLRK
GIFTKDVEDQAAIAKRLSQAVNDGFAGTIAMASQSAQNAKRARDLQKTMDSQQKRLQSVTEPFKGLSKEQ
MTEILMMAQRFKQQNQEREKQQRVERETQRQMRSRGMGGMER

Protein domains

Predicted by InterproScan.

• Plasmid recombination enzyme (Mob_Pre) (1-185)

Protein structure

No available structure.

Host bacterium

• ID: 21932
• GenBank: NZ_AP022132
• Plasmid name: pWP5-S18-CRE-02_6
• Incompatibility group: -
• Plasmid size: 2049 bp
• Coordinate of oriT [Strand]: 33..66 [+]
• Host baterium: Enterobacter cloacae strain WP5-S18-CRE-02

Cargo genes

• Drug resistance gene: -
• Virulence gene: -
• Metal resistance gene: -
• Degradation gene: -
• Symbiosis gene: -
• Anti-CRISPR: -