Detailed information of oriT

oriT

The information of the oriT region

• oriTDB ID: 121438
• Name: oriT_pBlaTEM
• Organism: Neisseria gonorrhoeae strain FC428
• Sequence Completeness: -
• NCBI accession of oriT (coordinates [strand]): NZ_AP018380 (4335..4363 [+], 29 nt)
• oriT length: 29 nt
• IRs (inverted repeats): 2..10, 14..22 (CAGTTTCTC..GAGAAACTG)
• Location of nic site: _
• Conserved sequence flanking the nic site: _
• Note: Predicted by oriTfinder 2.0

oriT sequence

• Length: 29 nt

>oriT_pBlaTEM
CCAGTTTCTCGAAGAGAAACTGATAAGTG

oriT secondary structure

Predicted by RNAfold.

Relaxase

MobA_MobL_EP178_RS13455_pBlaTEM

• ID: 13515
• GenBank: WP_127514845
• Name: MobA_MobL_EP178_RS13455_pBlaTEM
• UniProt ID: _
• Length: 463 a.a.
• Note: Predicted by oriTfinder 2.0

Relaxase protein sequence

• Length: 463 a.a.
• Molecular weight: 54473.95 Da
• Isoelectric Point: 8.2937

>WP_127514845.1 MobA/MobL family protein [Neisseria gonorrhoeae]
MAIYHLNVRYCSKSKGQSAQAKNDYINRNDKYSKRLDDLQFSGYGNMPKFAEDNPQEFWRLSDIYERANA
RVCTEIEFALPRELTLEQQQKLVSSFIENTVDSGSNKLPYSFIFSERQLDGIDRTAEQFFKRANTKSPEK
GGAMKTADFRDREFIQSVRKTWREQANQALEQYGYAARIDERSYKEQGIEQAPRARIDRVTWQELNRLEQ
EERQIVQELALKGQEINKEKSYLQKIEEKQAQGMGKYESKFAAAFSKLSESALKHDLSNEKEKDSKIHTQ
EEKVPQNRIQGLSQADFDQFLIDEWLPQIEKYVKAQEKRDGMEVEITQYDKDLQRIQGDYNKLTDKNQGF
LGLWETKEQKAKKKELEDEYKHTAEQRNAKSQELAEYSQKIKAYEQKTLEPINEKIAKYQADNPEIKMRS
LGFVKKIKAQGAYKAAQERMEREKQHQQEKQQRHLERESGLSL

Protein domains

Predicted by InterproScan.

• MobA/MobL family (MobA_MobL) (133-196)

• MobA/MobL family (MobA_MobL) (23-102)

Protein structure

No available structure.

Host bacterium

• ID: 21865
• GenBank: NZ_AP018380
• Plasmid name: pBlaTEM
• Incompatibility group: -
• Plasmid size: 5819 bp
• Coordinate of oriT [Strand]: 4335..4363 [+]
• Host baterium: Neisseria gonorrhoeae strain FC428

Cargo genes

• Drug resistance gene: blaTEM-1B
• Virulence gene: -
• Metal resistance gene: -
• Degradation gene: -
• Symbiosis gene: -
• Anti-CRISPR: -