Detailed information of oriT

oriT

The information of the oriT region

• oriTDB ID: 121370
• Name: oriT_p_af632
• Organism: Enterococcus faecalis strain UO.H3019
• Sequence Completeness: -
• NCBI accession of oriT (coordinates [strand]): NZ_CP144331 (3798..3847 [+], 50 nt)
• oriT length: 50 nt
• IRs (inverted repeats): _
• Location of nic site: _
• Conserved sequence flanking the nic site: _
• Note: Predicted by oriTfinder 2.0

oriT sequence

• Length: 50 nt

>oriT_p_af632
AATATCGCAACATGCTAGCATATTGCTCTGCTCGCAAAAAGAAAGCCTAC

oriT secondary structure

Predicted by RNAfold.

Relaxase

mobV_VXM27_RS14475_p_af632

• ID: 13481
• GenBank: WP_010715975
• Name: mobV_VXM27_RS14475_p_af632
• UniProt ID: _
• Length: 559 a.a.
• Note: Predicted by oriTfinder 2.0

Relaxase protein sequence

• Length: 559 a.a.
• Molecular weight: 65071.63 Da
• Isoelectric Point: 8.8311

>WP_010715975.1 MULTISPECIES: MobV family relaxase [Bacteria]
MSKIVARMEKMKVGNLSGIQRHNQRETDNHSNPDIDIEKSHLNYDLVNHGSINYREKIKQIIESQRISKR
AVRKDAVLVNEWIITSDTAFFQENTDTQAFFTDVVAYFSDRCGRQNVAYATVHLDETTPHMHLGIVPMYE
GRLSSKQVFSRQSLLEIQEELPNYLKERGYAIERGLRGSPQKHLSVKEYKDVQKELQVSKQELANQEQIL
AEKERELHSYEQAIFRIDRLLEEKNEEVKGKVQAMNQLEAKRNEIINSLQTTVLPDLANVKEKKFSLNGL
KYVLSASDLSAIKSITKDFETLRTQNKHLKIDNNTLTQENKELKQVNHVQELQITDLTHELTLKKEQLTA
FEEKQLNYDQSEQIKQELDKTTQKVSVLETDNKRLKDKITDLTYDFSELNEKYQEIKLKFDGLTTYLHER
LGQAKETILFTIQQGVKYLQNAPKLKKSLERYSKDRTYLIDEKGTLFLPPDTGSKGVTMSLNPHFYPLKA
PFYNRETGCYEFVGEYMANGRSRTNTLQLSEEQVLEKKAFTFEQSTDKKAWQQSKKYSRDMSKGRGLSR

Protein domains

Predicted by InterproScan.

• Plasmid recombination enzyme (Mob_Pre) (2-191)

Protein structure

No available structure.

Host bacterium

• ID: 21797
• GenBank: NZ_CP144331
• Plasmid name: p_af632
• Incompatibility group: -
• Plasmid size: 5240 bp
• Coordinate of oriT [Strand]: 3798..3847 [+]
• Host baterium: Enterococcus faecalis strain UO.H3019

Cargo genes

• Drug resistance gene: -
• Virulence gene: -
• Metal resistance gene: -
• Degradation gene: -
• Symbiosis gene: -
• Anti-CRISPR: -