Detailed information of oriT

oriT

The information of the oriT region

• oriTDB ID: 121320
• Name: oriT_pACMV7
• Organism: Acidiphilium multivorum AIU301
• Sequence Completeness: -
• NCBI accession of oriT (coordinates [strand]): NC_015189 (3566..3599 [+], 34 nt)
• oriT length: 34 nt
• IRs (inverted repeats): 4..10, 14..20 (ACATTGC..GCAATGT)
• Location of nic site: _
• Conserved sequence flanking the nic site: _
• Note: Predicted by oriTfinder 2.0

oriT sequence

• Length: 34 nt

>oriT_pACMV7
TGCACATTGCAAAGCAATGTATAAGCGCGCACTT

oriT secondary structure

Predicted by RNAfold.

Relaxase

mobQ_ACMV_RS19285_pACMV7

• ID: 13458
• GenBank: WP_013641308
• Name: mobQ_ACMV_RS19285_pACMV7
• UniProt ID: _
• Length: 373 a.a.
• Note: Predicted by oriTfinder 2.0

Relaxase protein sequence

• Length: 373 a.a.
• Molecular weight: 41884.08 Da
• Isoelectric Point: 9.1047

>WP_013641308.1 MobQ family relaxase [Acidiphilium multivorum]
MAIYHASVKVVGRGGGRSSVAASAYRSGECLTNERDGNTHDYTKKQGVVHREIMTPENAPAWMSDRSKLW
NGVEAAEKRKDAQLFRDVEIALPRELSREEQINLVRDFVKERCVDHGMVADIAVHEPRASDGEKQPHAHI
MLTMRHIEGESFGNKAREWNPDFATKDGKGFVKDKSPLLGLREGWAEHINRALERAHIAERVDHRSLTVQ
REVALEMSQDQTRPEPERLLAERCAQDLDREPQPKLGAAAAMERRGVQTDRGDQMRAVQGRNRERQGVWQ
QVREWGAQALDKARDWAVELRERLAGVDLSGLRTANLSAALAGADLSVLRQANQAAERAKQPTMARRPTK
EAVISRQPSRTPSKGRDGPEMDL

Protein domains

Predicted by InterproScan.

• MobA/MobL family (MobA_MobL) (17-210)

Protein structure

No available structure.

Host bacterium

• ID: 21747
• GenBank: NC_015189
• Plasmid name: pACMV7
• Incompatibility group: -
• Plasmid size: 5178 bp
• Coordinate of oriT [Strand]: 3566..3599 [+]
• Host baterium: Acidiphilium multivorum AIU301

Cargo genes

• Drug resistance gene: -
• Virulence gene: -
• Metal resistance gene: -
• Degradation gene: -
• Symbiosis gene: -
• Anti-CRISPR: -