Detailed information of oriT

oriT

The information of the oriT region

• oriTDB ID: 121065
• Name: oriT_FDAARGOS_1150|unnamed2
• Organism: Staphylococcus equorum strain FDAARGOS_1150
• Sequence Completeness: -
• NCBI accession of oriT (coordinates [strand]): NZ_CP068065 (2169..2266 [-], 98 nt)
• oriT length: 98 nt
• IRs (inverted repeats): _
• Location of nic site: _
• Conserved sequence flanking the nic site: _
• Note: Predicted by oriTfinder 2.0

oriT sequence

• Length: 98 nt

>oriT_FDAARGOS_1150|unnamed2
TCAGCTGAAACTTTGAATATGAGTGTGGCTTCTTTCGTTAAGAAAAAGGCACAGGGAAGTCGATTGGTAGCGCCCAAATTGGATAAAGAGACGCGACA

oriT secondary structure

Predicted by RNAfold.

Relaxase

Relaxase_I6J07_RS13625_FDAARGOS_1150|unnamed2

• ID: 13300
• GenBank: WP_069828097
• Name: Relaxase_I6J07_RS13625_FDAARGOS_1150|unnamed2
• UniProt ID: _
• Length: 319 a.a.
• Note: Predicted by oriTfinder 2.0

Relaxase protein sequence

• Length: 319 a.a.
• Molecular weight: 37139.19 Da
• Isoelectric Point: 7.5100

>WP_069828097.1 MULTISPECIES: relaxase/mobilization nuclease domain-containing protein [Staphylococcus]
MATAKISSSKSTSRAINYAEKRAVEKSGLNCDVDYAKSAFKATRELYDKTGGNQGHVVIQSFKPGEVTPE
QCNQLGLELAEKIAPNHQVAIYTHEDTEHVHNHIVINSIDLDTGKKFYNNKQALKDIRQANDEVCKTHNL
SIPNVQAQIRYTQAEQNIMDKAEDVKASWKNQIRIAIEDTKEQATDFNEFNELLKPKGVEIARVTDKTIT
YRHIEEDKKVRGSKLGNDYDKEELDDGFRLEKQRRNRQSEQEIRPNFKATKGDWDEFREENERRLRSERE
RRENERINAENERLRRQREQESRTTQSVNKKDRGIDLHL

Protein domains

Predicted by InterproScan.

• Relaxase/Mobilisation nuclease domain (Relaxase) (9-238)

Protein structure

No available structure.

Host bacterium

• ID: 21493
• GenBank: NZ_CP068065
• Plasmid name: FDAARGOS_1150|unnamed2
• Incompatibility group: -
• Plasmid size: 6788 bp
• Coordinate of oriT [Strand]: 2169..2266 [-]
• Host baterium: Staphylococcus equorum strain FDAARGOS_1150

Cargo genes

• Drug resistance gene: -
• Virulence gene: -
• Metal resistance gene: -
• Degradation gene: -
• Symbiosis gene: -
• Anti-CRISPR: -