Detailed information of oriT
oriT
The information of the oriT region
| oriTDB ID | 120727 |
| Name | oriT_pRHBSTW-00484_8  |
| Organism | Klebsiella sp. RHBSTW-00484 |
| Sequence Completeness | - |
| NCBI accession of oriT (coordinates [strand]) | NZ_CP055488 (2345..2404 [+], 60 nt) |
| oriT length | 60 nt |
| IRs (inverted repeats) | _ |
| Location of nic site | _ |
| Conserved sequence flanking the nic site |
_ |
| Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 60 nt
>oriT_pRHBSTW-00484_8
GGGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATACTGGCTTA
GGGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATACTGGCTTA
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure file
Host bacterium
| ID | 21156 | GenBank | NZ_CP055488 |
| Plasmid name | pRHBSTW-00484_8 | Incompatibility group | Col440II |
| Plasmid size | 4678 bp | Coordinate of oriT [Strand] | 2345..2404 [+] |
| Host baterium | Klebsiella sp. RHBSTW-00484 |
Cargo genes
| Drug resistance gene | - |
| Virulence gene | - |
| Metal resistance gene | - |
| Degradation gene | - |
| Symbiosis gene | - |
| Anti-CRISPR | - |