Detailed information of oriT
oriT
The information of the oriT region
oriTDB ID | 120606 |
Name | oriT_18|P5 |
Organism | Citrobacter freundii isolate 18 |
Sequence Completeness | - |
NCBI accession of oriT (coordinates [strand]) | NZ_OW849213 (3404..3463 [-], 60 nt) |
oriT length | 60 nt |
IRs (inverted repeats) | _ |
Location of nic site | _ |
Conserved sequence flanking the nic site |
_ |
Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 60 nt
>oriT_18|P5
GGGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATAGTGGCTTA
GGGTTTCGGGGCGCAGCCCTGAACCAGTCACGTAGCGCTAGCGGAGTGTATAGTGGCTTA
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure fileHost bacterium
ID | 21035 | GenBank | NZ_OW849213 |
Plasmid name | 18|P5 | Incompatibility group | ColRNAI |
Plasmid size | 3810 bp | Coordinate of oriT [Strand] | 3404..3463 [-] |
Host baterium | Citrobacter freundii isolate 18 |
Cargo genes
Drug resistance gene | - |
Virulence gene | - |
Metal resistance gene | - |
Degradation gene | - |
Symbiosis gene | - |
Anti-CRISPR | - |