Detailed information of oriT
oriT
The information of the oriT region
| oriTDB ID | 120550 |
| Name | oriT_pRHBSTW-00555_7  |
| Organism | Klebsiella grimontii strain RHBSTW-00555 |
| Sequence Completeness | - |
| NCBI accession of oriT (coordinates [strand]) | NZ_CP055321 (3989..4040 [-], 52 nt) |
| oriT length | 52 nt |
| IRs (inverted repeats) | 7..14, 17..24 (GCAAAATT..AATTTTGC) |
| Location of nic site | _ |
| Conserved sequence flanking the nic site |
_ |
| Note | Predicted by oriTfinder 2.0 |
oriT sequence
Download Length: 52 nt
>oriT_pRHBSTW-00555_7
AAATCTGCAAAATTAAAATTTTGCGTGGGGTGTGGGTATTTTTCGTGGTGAG
AAATCTGCAAAATTAAAATTTTGCGTGGGGTGTGGGTATTTTTCGTGGTGAG
Visualization of oriT structure
oriT secondary structure
Predicted by RNAfold.
Download structure file
Host bacterium
| ID | 20979 | GenBank | NZ_CP055321 |
| Plasmid name | pRHBSTW-00555_7 | Incompatibility group | - |
| Plasmid size | 5010 bp | Coordinate of oriT [Strand] | 3989..4040 [-] |
| Host baterium | Klebsiella grimontii strain RHBSTW-00555 |
Cargo genes
| Drug resistance gene | - |
| Virulence gene | - |
| Metal resistance gene | - |
| Degradation gene | - |
| Symbiosis gene | - |
| Anti-CRISPR | - |