Detailed information of oriT

oriT


The information of the oriT region


oriTDB ID   120439
Name   oriT_p8-L2724hy in_silico
Organism   Citrobacter portucalensis strain L2724hy
Sequence Completeness      -
NCBI accession of oriT (coordinates [strand])   NZ_CP136609 (3878..3937 [-], 60 nt)
oriT length   60 nt
IRs (inverted repeats)     _
Location of nic site      _
Conserved sequence flanking the
  nic site  
 
 _
Note   Predicted by oriTfinder 2.0

  oriT sequence  


Download         Length: 60 nt

>oriT_p8-L2724hy
GGGTTTCGGGGCGCAGCCCTGAACCAGTCACGCAGCGCTAGCGGAGTGTATACTGGCTTA

Visualization of oriT structure

  oriT secondary structure

Predicted by RNAfold.

Download structure file


Host bacterium


ID   20868 GenBank   NZ_CP136609
Plasmid name   p8-L2724hy Incompatibility group   Col440II
Plasmid size   5040 bp Coordinate of oriT [Strand]   3878..3937 [-]
Host baterium   Citrobacter portucalensis strain L2724hy

Cargo genes


Drug resistance gene   -
Virulence gene   -
Metal resistance gene   -
Degradation gene   -
Symbiosis gene   -
Anti-CRISPR   -